Difference between revisions of "Part:BBa K2271066"
Line 10: Line 10:
  
  
 +
 +
 +
 +
<span class='h3bb'>Sequence and Features</span>
 +
<partinfo>BBa_K2271066 SequenceAndFeatures</partinfo>
  
 
===References===
 
===References===
Line 20: Line 25:
 
Michael E. Lee, William C. DeLoache, Bernardo Cervantes, and John E. Dueber <br>
 
Michael E. Lee, William C. DeLoache, Bernardo Cervantes, and John E. Dueber <br>
 
ACS Synth. Biol., 2015, 4 (9), pp 975–986 DOI: 10.1021/sb500366v
 
ACS Synth. Biol., 2015, 4 (9), pp 975–986 DOI: 10.1021/sb500366v
−
 
−
 
−
<span class='h3bb'>Sequence and Features</span>
 
−
<partinfo>BBa_K2271066 SequenceAndFeatures</partinfo>
 
  
  

Revision as of 22:28, 31 October 2017


mRuby-ePTS1

Usage and Biology

This Part is a composite Part containing the fluorescent protein mRuby targeted to the peroxisome with an enhanced PTS1 described by DeLoache et al. (2016)[1.]. The part is designed as a peroxisomal lumen marker for S. cerevisiea. Using the TDH3 promoter and the HHF1 terminator. For fluorometric and microscopic applications the optimal excitation of 559 nm and emission of 600 nm is discriped.

Experimental Design and Results

For the validation the S. cerevisiae Strain BY4742 was tranformed with this part. The cells were fixated and microscoped with an Elyra PS microscope. A typical peroxisomal localisation could be validated (Figure 1).

Figure 1 mRuby fused to the ePts1 described by DeLoache et al. (2016) [1.] The mRuby is localised in the peroxisomes of the cells



Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 860
    Illegal BamHI site found at 1577
    Illegal XhoI site found at 1613
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]

References

[1] Towards repurposing the yeast peroxisome for compartmentalizing heterologous metabolic pathways
William C. DeLoache, Zachary N. Russ & John E. Dueber
Nat. Commun. 7:11152 doi: 10.1038/ncomms11152 (2016).


[2] A Highly Characterized Yeast Toolkit for Modular, Multipart Assembly (2015)
Michael E. Lee, William C. DeLoache, Bernardo Cervantes, and John E. Dueber
ACS Synth. Biol., 2015, 4 (9), pp 975–986 DOI: 10.1021/sb500366v