Difference between revisions of "Part:BBa K2308003"
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<span class='h3bb'>Sequence and Features</span> | <span class='h3bb'>Sequence and Features</span> | ||
<partinfo>BBa_K2308003 SequenceAndFeatures</partinfo> | <partinfo>BBa_K2308003 SequenceAndFeatures</partinfo> | ||
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<partinfo>BBa_K2308003 parameters</partinfo> | <partinfo>BBa_K2308003 parameters</partinfo> | ||
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+ | {{:Team:ECUST/statics}} | ||
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+ | <p>sYFP2(BBa_K2308003) is the key part in our experiment. It is used both for fusion expression (see BBa_K2308002) and inducible cytoplasm expression (combined with BBa_K2308016), and the host cell is <i>Rhodobacter sphaeroides 2.4.1. </i></p><br> | ||
+ | <center> | ||
+ | <div class="row"> | ||
+ | <div class="col-md-6"> | ||
+ | <img src="https://static.igem.org/mediawiki/2017/4/47/F1-D.png" style="width: 400px;"> | ||
+ | </div> | ||
+ | <div class="col-md-6"> | ||
+ | <img src="https://static.igem.org/mediawiki/2017/4/47/F1-D.png" style="width: 400px;"> | ||
+ | </div> | ||
+ | <p>Figure 1:PCR test of BBa_K2308003(optimized sYFP2) and original sYFP2</p><br><br> | ||
+ | </div> | ||
+ | </center> | ||
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+ | <p> In inducible cytoplasm expression experiment, we used part BBa_K2308016 to turn the Rhodobacter sphaedoides 2.4.1 into inducible strains, and IPTG was added (800 μM in final volume)when the OD700 of the strain was about 0.4(grown for about 24h).</p><br> | ||
+ | <center> | ||
+ | <div class="row"> | ||
+ | <div class="col-md-6"> | ||
+ | <img src="https://static.igem.org/mediawiki/2017/thumb/c/c7/Kp6.png" style="width: 400px;"> | ||
+ | </div> | ||
+ | <div class="col-md-6"> | ||
+ | <img src="https://static.igem.org/mediawiki/2017/thumb/2/2e/Kp7.png" style="width: 400px;"> | ||
+ | </div> | ||
+ | <p>Figure 2:fluorescent image of sYFP2 (original) and sYFP2(optimized)</p><br><br> | ||
+ | </div> | ||
+ | <div class="row"> | ||
+ | <div class="col-md-6"> | ||
+ | <img src="https://static.igem.org/mediawiki/2017/9/99/F5-A%281%29.png" style="width: 400px;"> | ||
+ | </div> | ||
+ | <div class="col-md-6"> | ||
+ | <img src="https://static.igem.org/mediawiki/2017/9/99/F5-A%281%29.png" style="width: 400px;"> | ||
+ | </div> | ||
+ | <p>Figure 3:Fluorescence intensity of WT, sYFP2(optimized), sYFP2(unoptimized) strains.</p><br><br> | ||
+ | </div> | ||
+ | </center> | ||
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+ | <p> It is obvious that after the codon optimization, sYFP2 can be better expressed in Rhodobacter sphaeroides 2.4.1.</p><br> | ||
+ | <center> | ||
+ | <img src="" alt=""> | ||
+ | <p></p><br><br> | ||
+ | </center> | ||
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+ | </body> | ||
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+ | </html> |
Revision as of 10:18, 31 October 2017
coding sequence of sYFP2 (codon optimized for Rhodobacter sphaeroides 2.4.1)
This part is a coding gene of sYFP2 (super yellow fluorescent protein), and the codes are optimized for expression in Rhodobacter Sphaeroides.
This part is an improvement of part (BBa_K864100)
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
direction | forward |
sYFP2(BBa_K2308003) is the key part in our experiment. It is used both for fusion expression (see BBa_K2308002) and inducible cytoplasm expression (combined with BBa_K2308016), and the host cell is Rhodobacter sphaeroides 2.4.1.
Figure 1:PCR test of BBa_K2308003(optimized sYFP2) and original sYFP2
In inducible cytoplasm expression experiment, we used part BBa_K2308016 to turn the Rhodobacter sphaedoides 2.4.1 into inducible strains, and IPTG was added (800 μM in final volume)when the OD700 of the strain was about 0.4(grown for about 24h).
Figure 2:fluorescent image of sYFP2 (original) and sYFP2(optimized)
Figure 3:Fluorescence intensity of WT, sYFP2(optimized), sYFP2(unoptimized) strains.
It is obvious that after the codon optimization, sYFP2 can be better expressed in Rhodobacter sphaeroides 2.4.1.