Difference between revisions of "Part:BBa K2267040"
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Denise Deng (Talk | contribs) |
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Quorum sensing is a naturally occurring mechanism that certain strains of bacteria use to regulate gene expression in response to their population density. These bacteria secrete autoinducer signalling molecules, such as N-acyl homoserine lactones (AHLs), that bind to transcription factors to alter gene expression. | Quorum sensing is a naturally occurring mechanism that certain strains of bacteria use to regulate gene expression in response to their population density. These bacteria secrete autoinducer signalling molecules, such as N-acyl homoserine lactones (AHLs), that bind to transcription factors to alter gene expression. | ||
In this case, the constitutively expressed LuxR transcriptional regulator (C0062) is activated by the binding of 3O-C6 AHL, an AHL quorum signal. The activated LuxR regulator binds to a LuxR-inducible promoter, pLux, upstream of a GFP reporter. As a result, GFP is expressed when the receiver device is induced with 3O-C6 AHL. We designed this part to characterize the activation range of the Lux receiver device. | In this case, the constitutively expressed LuxR transcriptional regulator (C0062) is activated by the binding of 3O-C6 AHL, an AHL quorum signal. The activated LuxR regulator binds to a LuxR-inducible promoter, pLux, upstream of a GFP reporter. As a result, GFP is expressed when the receiver device is induced with 3O-C6 AHL. We designed this part to characterize the activation range of the Lux receiver device. | ||
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part1: https://parts.igem.org/Part:BBa_K2267026+https://parts.igem.org/Part:BBa_K2267029+https://parts.igem.org/Part:BBa_K319039. | part1: https://parts.igem.org/Part:BBa_K2267026+https://parts.igem.org/Part:BBa_K2267029+https://parts.igem.org/Part:BBa_K319039. | ||
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part8: https://parts.igem.org/Part:BBa_K2267026+ https://parts.igem.org/Part:BBa_K2267033+https://parts.igem.org/Part:BBa_K319039. | part8: https://parts.igem.org/Part:BBa_K2267026+ https://parts.igem.org/Part:BBa_K2267033+https://parts.igem.org/Part:BBa_K319039. | ||
− | part1: https://parts.igem.org/Part:BBa_K2267043 | + | part1: https://parts.igem.org/Part:BBa_K2267043 |
− | part3: https://parts.igem.org/Part:BBa_K2267041 | + | part3: https://parts.igem.org/Part:BBa_K2267041 |
− | part4: https://parts.igem.org/Part:BBa_K2267042 | + | part4: https://parts.igem.org/Part:BBa_K2267042 |
− | part6: https://parts.igem.org/Part:BBa_K2267044 | + | part6: https://parts.igem.org/Part:BBa_K2267044 |
− | part8: https://parts.igem.org/Part:BBa_K2267045 | + | part8: https://parts.igem.org/Part:BBa_K2267045 |
===result=== | ===result=== |
Revision as of 22:27, 27 October 2017
LuxR-I-Plux-GFP
This composite part is based on the Lux quorum-sensing system from Vibrio fischerii. It consists of a Lux receiver device and a GFP reporter that is activated in the presence of a 3O-C6 AHL signal. Quorum sensing is a naturally occurring mechanism that certain strains of bacteria use to regulate gene expression in response to their population density. These bacteria secrete autoinducer signalling molecules, such as N-acyl homoserine lactones (AHLs), that bind to transcription factors to alter gene expression. In this case, the constitutively expressed LuxR transcriptional regulator (C0062) is activated by the binding of 3O-C6 AHL, an AHL quorum signal. The activated LuxR regulator binds to a LuxR-inducible promoter, pLux, upstream of a GFP reporter. As a result, GFP is expressed when the receiver device is induced with 3O-C6 AHL. We designed this part to characterize the activation range of the Lux receiver device.
is Control,
part3: https://parts.igem.org/Part:BBa_K2267026+ https://parts.igem.org/Part:BBa_K2267030+https://parts.igem.org/Part:BBa_K319039.
part4: https://parts.igem.org/Part:BBa_K2267026+ https://parts.igem.org/Part:BBa_K2267031+https://parts.igem.org/Part:BBa_K319039.
part6: https://parts.igem.org/Part:BBa_K2267026+ https://parts.igem.org/Part:BBa_K2267032+https://parts.igem.org/Part:BBa_K319039.
part8: https://parts.igem.org/Part:BBa_K2267026+ https://parts.igem.org/Part:BBa_K2267033+https://parts.igem.org/Part:BBa_K319039.
part1: https://parts.igem.org/Part:BBa_K2267043
part3: https://parts.igem.org/Part:BBa_K2267041
part4: https://parts.igem.org/Part:BBa_K2267042
part6: https://parts.igem.org/Part:BBa_K2267044
part8: https://parts.igem.org/Part:BBa_K2267045
result
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 7
Illegal NheI site found at 30
Illegal NheI site found at 837
Illegal NheI site found at 860 - 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 928
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1452
Illegal BsaI.rc site found at 2179