Difference between revisions of "Part:BBa K2382009"
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| − | + | ==Usage and Biology== | |
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| − | <span class='h3bb'>Sequence and Features</span> | + | ===<span class='h3bb'>Sequence and Features</span>=== |
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| + | ===Short Description=== | ||
| + | A fusion protein composed of thioredoxin and MSMEG_5998. Between the two small proteins are flexible linkers. | ||
| + | |||
| + | ===Expression results=== | ||
| + | =====IPTG induction===== | ||
| + | MSMEG_5998 was synthesized by Allbio Life Co., Ltd and put into | ||
| + | the standard backbone pSB1C3. First, we transformed the plasmids into E. coli BL21 (DE3) | ||
| + | strain to express our proteins. Then IPTG was used to induce the expression system, | ||
| + | since all plasmids in our project had T7 promoter. We sonicated E. coli and did 9500 rpm | ||
| + | and 13000 rpm centrifugation to remove the cell pellet and obtain the supernatant. To | ||
| + | confirm the suitable concentration of cell supernatant, we ranwestern blot. The results are demonstrated in the Fig 1. After centrifuging for two times, we could find a high percentage of proteins in the | ||
| + | cell supernatant (the 13000 Su group). | ||
| + | |||
| + | [[File:Synthetic MSMEG5998.png|350px|thumb|left|figure 1]] | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | <p class=MsoNormal><span lang=EN-US> </span></p> | ||
| + | Figure 1: Cell lysates in the process of two times centrifuge were analyzed by SDS-PAGE and coomassie | ||
| + | brilliant blue staining. 9500 T meant the initial sample gotten after sonication; 9500 P and 13000 T | ||
| + | meant the pellet and the supernatant gotten after 9500 rpm for 20 min; 13000 P and 13000 Su meant | ||
| + | the pellet and the supernatant gotten after 13000 rpm for 20 min. | ||
| + | ===References=== | ||
| + | |||
| + | (1)Taylor, M.C., et al., Identification and characterization of two families of F420H2‐dependent reductases from Mycobacteria that catalyse aflatoxin degradation. Molecular microbiology, 2010. 78(3): p. 561-575. | ||
| + | |||
| + | (2)Lapalikar, G.V., et al., F420H2-dependent degradation of aflatoxin and other furanocoumarins is widespread throughout the Actinomycetales. PLoS One, 2012. 7(2): p. e30114. | ||
Revision as of 23:49, 26 October 2017
Thioredoxin-MSMEG_5998 fusion protein
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal BamHI site found at 367
Illegal XhoI site found at 373 - 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 812
- 1000COMPATIBLE WITH RFC[1000]
Short Description
A fusion protein composed of thioredoxin and MSMEG_5998. Between the two small proteins are flexible linkers.
Expression results
IPTG induction
MSMEG_5998 was synthesized by Allbio Life Co., Ltd and put into the standard backbone pSB1C3. First, we transformed the plasmids into E. coli BL21 (DE3) strain to express our proteins. Then IPTG was used to induce the expression system, since all plasmids in our project had T7 promoter. We sonicated E. coli and did 9500 rpm and 13000 rpm centrifugation to remove the cell pellet and obtain the supernatant. To confirm the suitable concentration of cell supernatant, we ranwestern blot. The results are demonstrated in the Fig 1. After centrifuging for two times, we could find a high percentage of proteins in the cell supernatant (the 13000 Su group).
Figure 1: Cell lysates in the process of two times centrifuge were analyzed by SDS-PAGE and coomassie brilliant blue staining. 9500 T meant the initial sample gotten after sonication; 9500 P and 13000 T meant the pellet and the supernatant gotten after 9500 rpm for 20 min; 13000 P and 13000 Su meant the pellet and the supernatant gotten after 13000 rpm for 20 min.
References
(1)Taylor, M.C., et al., Identification and characterization of two families of F420H2‐dependent reductases from Mycobacteria that catalyse aflatoxin degradation. Molecular microbiology, 2010. 78(3): p. 561-575.
(2)Lapalikar, G.V., et al., F420H2-dependent degradation of aflatoxin and other furanocoumarins is widespread throughout the Actinomycetales. PLoS One, 2012. 7(2): p. e30114.