Difference between revisions of "Part:BBa K103006"

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This protein structure was predicted using threading and protein fold prediction and may differ from actual one.
 
This protein structure was predicted using threading and protein fold prediction and may differ from actual one.
 
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| [[Image:Ompalinker.jpg|200px]]
 
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<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>

Revision as of 13:39, 26 October 2017

OmpA outer membrane protein A fused to linker; displays proteins on cell surface

One of our basic bricks used to create fusions attached to outer membrane

Usage and Biology

  • This part uses OmpA (outer membrane protein A [http://www.ncbi.nlm.nih.gov/pubmed/17559395?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum]) fragment (AAs 46-159) N-terminally fused with lipoprotein signal peptide fragment (AAs 1-9)
  • Proteins fused to Ompa-link are presented on cell's surface
  • Unstructuralized linker (Gly Ser Gly) allows proper folding of both fusion partners
  • In our project Ompa-link is used as outer membrane anchor for our selection system
  • This brick contains our nonstandard restriction sites (NdeI and SacI) that allow 'scarless' cloning and easy creation of translation fusions
Ompalinker.jpg

Improvement by NEFU_China

Ompalinker.jpg

This protein structure was predicted using threading and protein fold prediction and may differ from actual one.

| Ompalinker.jpg Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]