Difference between revisions of "Part:BBa K2202002"
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<partinfo>BBa_K2202002 short</partinfo> | <partinfo>BBa_K2202002 short</partinfo> | ||
| − | This part works together with four other parts ( BBa_K2202001, BBa_K2202002, BBa_K2202003 and BBa_K2202004) and requires the chassis to contain HIV reverse transcriptase and Murine leukemia reverse transcriptase. The Part essentially produces a ncRNA which is later reverse transcribed to a single-stranded DNA that binds together with four other ssDNA produced to make a 2-dimensional structure. This 2D structure, upon detecting a Huntington's Disease biomarker (hsa-miR-34b-3p), folds into a tetrahedron with a G-quadruplex. Colorimetric or fluorescent reagents such as ABTS and Thioflavin T can be used to detect this G-quadruplex. Hence our part functions as a diagnostic device for nucleic acid based biomarkers. | + | This part is an improvement to BBa_K2202003. This part works together with four other parts ( BBa_K2202001, BBa_K2202002, BBa_K2202003 and BBa_K2202004) and requires the chassis to contain HIV reverse transcriptase and Murine leukemia reverse transcriptase. The Part essentially produces a ncRNA which is later reverse transcribed to a single-stranded DNA that binds together with four other ssDNA produced to make a 2-dimensional structure. This 2D structure, upon detecting a Huntington's Disease biomarker (hsa-miR-34b-3p), folds into a tetrahedron with a G-quadruplex. Colorimetric or fluorescent reagents such as ABTS and Thioflavin T can be used to detect this G-quadruplex. Hence our part functions as a diagnostic device for nucleic acid based biomarkers. |
Revision as of 11:55, 22 October 2017
ssDNA for producing in-vivo tetrahedral structure Strand3
This part is an improvement to BBa_K2202003. This part works together with four other parts ( BBa_K2202001, BBa_K2202002, BBa_K2202003 and BBa_K2202004) and requires the chassis to contain HIV reverse transcriptase and Murine leukemia reverse transcriptase. The Part essentially produces a ncRNA which is later reverse transcribed to a single-stranded DNA that binds together with four other ssDNA produced to make a 2-dimensional structure. This 2D structure, upon detecting a Huntington's Disease biomarker (hsa-miR-34b-3p), folds into a tetrahedron with a G-quadruplex. Colorimetric or fluorescent reagents such as ABTS and Thioflavin T can be used to detect this G-quadruplex. Hence our part functions as a diagnostic device for nucleic acid based biomarkers.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 101
Illegal SapI site found at 272