Difference between revisions of "User:SBurke"

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[[Assembly Ladders]]
 
[[Assembly Ladders]]
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[[Problems with PCR using VR/VF2]]
  
  

Revision as of 16:11, 20 August 2007

Assembly Ladders

Problems with PCR using VR/VF2



Robotic Assembly

  • Assembly was the same as the one on 6/7/2007 except it used the old construction plasmid (prepped by ML on 3.13)
  • Tested transformation of 1ul of pSB1AK3 (LIGATED) in 50ul cells, plated all out on AK plates
  • Transform 1ul into 50ul cells (Top10-0008), do transformation on thermal module. Plate all 251ul on correct antibiotic plates.
  • Began counting colonies at 12:45PM


Construct
color
Assembly construct Number of colonies
1ul
~22hrs
RFP A. 1AC3.J04500.I13501 167/184
GFP B. 1AC3.R0010.I13504 80/91
RFP C. 1AT3.J04500.I13501 41/61
GFP D. 1AT3.R0010.I13504 24/40
RFP E. 1AK3.J04500.I13501 18/811
GFP F. 1AK3.R0010.I13504 0
X-S control 69 (250ul plated)
pUC control (in lig prod as usual) 0 (250ul plated)
RFP J04450 734/734 (plated 50ul; 250ul plating yields 3670)
pSB1AK3 (ligated) 41 (250ul plated)


Assembly Plate Resulting construct Number of colonies
1ul
~22hrs
2A BBa_P200714 1
2B BBa_P20060 2
2C BBa_Q200514 7
2D BBa_B3210 41
2E BBa_B3210 20
2F BBa_B3209 9
2G BBa_B3203 17
2H BBa_B3202 1