Difference between revisions of "Part:BBa K1741000"

Revision as of 05:03, 27 September 2015

sfGFP under arabinose promoter s1 without AraC (Arashort1)

In commercially available expression vectors arabinose promoter araBAD is usually used together with a gene for AraC transcription activator / repressor to make the system independent of chromosomal copy of AraC gene. We fused the araBAD promoter without AraC reading frame, as other sugar induced promoters to sfGFP. The shorter version of the popular promoter is still functional i.e. induced by arabinose. Arabinose induced (0,4%) in a a short time (1-8h) expression is a bit lower than driven by AraC-araBAD but after a longer time like 18h the GFP level is higher than from AraC-araBAD promoter. New shorter versions of arabinose induced promoters, all originating from E. coli genome were compared to the biobrick BBa_K1481002, provided last year by Poznan_Bioinf team.

Sequence and Features

Assembly Compatibility:

10
COMPATIBLE WITH RFC[10]
12
COMPATIBLE WITH RFC[12]
21
INCOMPATIBLE WITH RFC[21]
Illegal BamHI site found at 236
23
COMPATIBLE WITH RFC[23]
25
INCOMPATIBLE WITH RFC[25]
Illegal AgeI site found at 71
1000
INCOMPATIBLE WITH RFC[1000]
Illegal SapI site found at 53
Illegal SapI.rc site found at 352

Characteristics and results

Legend AraWT - [BBa_K1481002] Arashort1 - [BBa_1471000] Arashort2 - [BBa_1471002]

@@ Line 14: / Line 14: @@
 Legend
 AraWT - [[https://parts.igem.org/Part:BBa_K1481002 BBa_K1481002]]
+Arashort1 - [[https://parts.igem.org/Part:BBa_K1471000 BBa_1471000]]
+Arashort2 - [[https://parts.igem.org/Part:BBa_K1471002 BBa_1471002]]
 https://static.igem.org/mediawiki/parts/e/ec/Teamuampoznanarabinose2lbgraph.png