Difference between revisions of "Part:BBa K1813007"
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<partinfo>BBa_K1813007 short</partinfo>
 
<partinfo>BBa_K1813007 short</partinfo>
  
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nicD
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<i>nicD</i> Gen Bank accession number Q88FY3.1.
  
 
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<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>
 
<partinfo>BBa_K1813007 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K1813007 SequenceAndFeatures</partinfo>
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<p>Codon optimized coding sequence of <i>nicD</i>, an enzyme from the <i>Pseudmonas putida</i> bacterium KT2240, for E.Coli. This composite part was used to make our part <html><a href="https://parts.igem.org/wiki/index.php?title=Part:BBa_K1813015">BBa_K1813015</a> </html> and  
 
<p>Codon optimized coding sequence of <i>nicD</i>, an enzyme from the <i>Pseudmonas putida</i> bacterium KT2240, for E.Coli. This composite part was used to make our part <html><a href="https://parts.igem.org/wiki/index.php?title=Part:BBa_K1813015">BBa_K1813015</a> </html> and  
 
<html><a href="https://parts.igem.org/Part:BBa_K1813021">BBa_K1813021</a> </html>.  
 
<html><a href="https://parts.igem.org/Part:BBa_K1813021">BBa_K1813021</a> </html>.  
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<h4>Part Origin:</h4>
 
<h4>Part Origin:</h4>

Revision as of 22:01, 18 September 2015

nicD

nicD Gen Bank accession number Q88FY3.1.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 727
  • 1000
    COMPATIBLE WITH RFC[1000]

Background of nicD:

Part Description:

Codon optimized coding sequence of nicD, an enzyme from the Pseudmonas putida bacterium KT2240, for E.Coli. This composite part was used to make our part BBa_K1813015 and BBa_K1813021 .

Part Origin:

Originally cloned and characterized by Jimenez et al. from Pseudmonas putida KT2240 [1].

Part Function:

The enzyme coded for by nicD is a N-Formylmaleamate Deformylase that converts N-Formylmaleamic (NFM) to Maleamic Acid, also producing formic acid.

References:

[1] Jose I. Jimenez, Angeles Canales, Jesus Jimenez-Barbero, et al. (2008)Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440. PNAS 105(32): doi10.1073/pnas.0802273105