Difference between revisions of "Part:BBa K1813006"
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<h2>Background of <i>nicC</i></h2>
 
<h2>Background of <i>nicC</i></h2>
 
<h4>Part Description:</h4>
 
<h4>Part Description:</h4>
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<p>Codon optimized coding sequence of <i>nicC</i>, an enzyme from the ''Pseudmonas putida'' bacterium KT2240, for E.Coli. This composite part was used to make our part <a href="https://parts.igem.org/Part:BBa_K1813006">BBa_K1813006</a>. </p>
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<p>Codon optimized coding sequence of <i>nicC</i>, an enzyme from the <i>Pseudmonas putida</i> bacterium KT2240, for E.Coli. This composite part was used to make our part <a href="https://parts.igem.org/wiki/index.php?title=Part:BBa_K1813020">BBa_K1813020</a>. </p>
  
 
<h4>Part Origin:</h4>
 
<h4>Part Origin:</h4>
−
<p>Originally cloned and characterized by Jimenez et al. from Pseudmonas putida KT2240 (1).</p>
+
<p>Originally cloned and characterized by Jimenez et al. from <i>Pseudmonas putida</i> KT2240 [1].</p>
  
 
<h4>Part Function:</h4>
 
<h4>Part Function:</h4>
−
<p>The enzyme coded for by ''nicC'' converts 6-Hydroxynicitinoic acid (6-HNA) to 2,5-dihydroxypyridine (2,5-DHP).</p>
+
<p>The enzyme coded for by <i>nicC</i> converts 6-Hydroxynicitinoic acid (6-HNA) to 2,5-dihydroxypyridine (2,5-DHP).</p>
  
 
<h4>References:</h4>
 
<h4>References:</h4>
−
1) Jose I. Jimenez, Angeles Canales, Jesus Jimenez-Barbero, et al. (2008)Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440. PNAS 105(32): doi10.1073/pnas.0802273105
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[1] Jose I. Jimenez, Angeles Canales, Jesus Jimenez-Barbero, et al. (2008)Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440. PNAS 105(32): doi10.1073/pnas.0802273105

Revision as of 21:25, 18 September 2015

nicC

nicC Gen Bank accession no.: (Q88FY2.1).


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 244
  • 1000
    COMPATIBLE WITH RFC[1000]

Background of nicC

Part Description:

Codon optimized coding sequence of nicC, an enzyme from the Pseudmonas putida bacterium KT2240, for E.Coli. This composite part was used to make our part BBa_K1813020.

Part Origin:

Originally cloned and characterized by Jimenez et al. from Pseudmonas putida KT2240 [1].

Part Function:

The enzyme coded for by nicC converts 6-Hydroxynicitinoic acid (6-HNA) to 2,5-dihydroxypyridine (2,5-DHP).

References:

[1] Jose I. Jimenez, Angeles Canales, Jesus Jimenez-Barbero, et al. (2008)Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440. PNAS 105(32): doi10.1073/pnas.0802273105