Difference between revisions of "Part:BBa K1723002:Experience"
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Revision as of 18:05, 18 September 2015
Applications of BBa_K1723002
This picture represent the system we want to build using this promoter: a transistor like element in cell. The complex dCas9-sgRNA will bind on the promoter and activate or inhibit it.
Effects of BBa_K1723000 on BBa_K1723001 promoter
This chart present the effects of dCas9-ω (BBa_K1723000) on the PAM rich URS J23117 promoter (BBa_K1723001) when provided following sgRNAs:
[A] sgRNA Z4 (BBa_K1723003), activating
[A/R1] sgRNA Z4 (BBa_K1723003), activating, AND sgRNA Z35 (BBa_K1723004), inhibiting
[A/R2] sgRNA Z4 (BBa_K1723003), activating AND sgRNA Z0 (BBa_K1723002), inhibiting
[R2] sgRNA Z0 (BBa_K1723002), inhibiting
[R1] sgRNA Z35 (BBa_K1723004), inhibiting
In comparison with:
[B] apo-dCas9-ω (=no sgRNA)
[Af] no dCas9-ω, no sgRNA
This chart show the promoter PAM rich URS J23117 (BBa_K1723001) for different sgRNA of our collection. Specifically, we see that BBa_K1723002, when in complex with dCas9-ω, promoter PAM rich URS J23117 (BBa_K1723001) strength stay low. Visit our website for more informations: http://2015.igem.org/Team:EPF_Lausanne
promoters strength were assessed using GFPmut2 reporter.
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