Difference between revisions of "Part:BBa K1725301"
Line 12: | Line 12: | ||
| Degenerate sequence | | Degenerate sequence | ||
| TCACACA<font color="red">NR</font>A<font color="red">RR</font>G | | TCACACA<font color="red">NR</font>A<font color="red">RR</font>G | ||
− | | | + | | |
|- | |- | ||
| BBa_K1725301 | | BBa_K1725301 | ||
| TCACACA<font color="red">GG</font>A<font color="red">GG</font>G | | TCACACA<font color="red">GG</font>A<font color="red">GG</font>G | ||
− | | | + | | 15730.86 |
|- | |- | ||
| BBa_K1725302 | | BBa_K1725302 | ||
| TCACACA<font color="red">GG</font>A<font color="red">GA</font>G | | TCACACA<font color="red">GG</font>A<font color="red">GA</font>G | ||
− | | | + | | 12493.41 |
|- | |- | ||
| BBa_K1725303 | | BBa_K1725303 | ||
| TCACACA<font color="red">GG</font>A<font color="red">AG</font>G | | TCACACA<font color="red">GG</font>A<font color="red">AG</font>G | ||
− | | | + | | 8716.05 |
|- | |- | ||
| BBa_K1725304 | | BBa_K1725304 | ||
| TCACACA<font color="red">AG</font>A<font color="red">GG</font>G | | TCACACA<font color="red">AG</font>A<font color="red">GG</font>G | ||
− | | | + | | 7247.43 |
|- | |- | ||
| BBa_K1725305 | | BBa_K1725305 | ||
| TCACACA<font color="red">AG</font>A<font color="red">AG</font>G | | TCACACA<font color="red">AG</font>A<font color="red">AG</font>G | ||
− | | | + | | 5532.39 |
|- | |- | ||
| BBa_K1725306 | | BBa_K1725306 | ||
| TCACACA<font color="red">CG</font>A<font color="red">GG</font>G | | TCACACA<font color="red">CG</font>A<font color="red">GG</font>G | ||
− | | | + | | 3880.58 |
|- | |- | ||
| BBa_K1725307 | | BBa_K1725307 | ||
| TCACACA<font color="red">TG</font>A<font color="red">GG</font>G | | TCACACA<font color="red">TG</font>A<font color="red">GG</font>G | ||
− | | | + | | 3880.58 |
|- | |- | ||
| BBa_K1725308 | | BBa_K1725308 | ||
| TCACACA<font color="red">AA</font>A<font color="red">AG</font>G | | TCACACA<font color="red">AA</font>A<font color="red">AG</font>G | ||
− | | | + | | 2574.21 |
|- | |- | ||
| BBa_K1725309 | | BBa_K1725309 | ||
| TCACACA<font color="red">AA</font>A<font color="red">GG</font>G | | TCACACA<font color="red">AA</font>A<font color="red">GG</font>G | ||
− | | | + | | 2574.21 |
|- | |- | ||
| BBa_K1725310 | | BBa_K1725310 | ||
| TCACACA<font color="red">CA</font>A<font color="red">AG</font>G | | TCACACA<font color="red">CA</font>A<font color="red">AG</font>G | ||
− | | | + | | 2574.21 |
|- | |- | ||
| BBa_K1725311 | | BBa_K1725311 | ||
| TCACACA<font color="red">CA</font>A<font color="red">GG</font>G | | TCACACA<font color="red">CA</font>A<font color="red">GG</font>G | ||
− | | | + | | 2574.21 |
|- | |- | ||
| BBa_K1725312 | | BBa_K1725312 | ||
| TCACACA<font color="red">GA</font>A<font color="red">AG</font>G | | TCACACA<font color="red">GA</font>A<font color="red">AG</font>G | ||
− | | | + | | 2574.21 |
|- | |- | ||
| BBa_K1725313 | | BBa_K1725313 | ||
| TCACACA<font color="red">TA</font>A<font color="red">AG</font>G | | TCACACA<font color="red">TA</font>A<font color="red">AG</font>G | ||
− | | | + | | 2574.21 |
|- | |- | ||
| BBa_K1725314 | | BBa_K1725314 | ||
| TCACACA<font color="red">TA</font>A<font color="red">GG</font>G | | TCACACA<font color="red">TA</font>A<font color="red">GG</font>G | ||
− | | | + | | 2574.21 |
|- | |- | ||
| BBa_K1725315 | | BBa_K1725315 | ||
| TCACACA<font color="red">TG</font>A<font color="red">AG</font>G | | TCACACA<font color="red">TG</font>A<font color="red">AG</font>G | ||
− | | | + | | 2574.21 |
|- | |- | ||
| BBa_K1725316 | | BBa_K1725316 | ||
| TCACACA<font color="red">CG</font>A<font color="red">AG</font>G | | TCACACA<font color="red">CG</font>A<font color="red">AG</font>G | ||
− | | | + | | 2352.63 |
|- | |- | ||
| BBa_K1725317 | | BBa_K1725317 | ||
| TCACACA<font color="red">GG</font>A<font color="red">AA</font>G | | TCACACA<font color="red">GG</font>A<font color="red">AA</font>G | ||
− | | | + | | 2161.77 |
|- | |- | ||
| BBa_K1725318 | | BBa_K1725318 | ||
| TCACACA<font color="red">AG</font>A<font color="red">GA</font>G | | TCACACA<font color="red">AG</font>A<font color="red">GA</font>G | ||
− | | | + | | 1969.19 |
|- | |- | ||
| BBa_K1725319 | | BBa_K1725319 | ||
| TCACACA<font color="red">TG</font>A<font color="red">GA</font>G | | TCACACA<font color="red">TG</font>A<font color="red">GA</font>G | ||
− | | | + | | 1506.8 |
|- | |- | ||
| BBa_K1725320 | | BBa_K1725320 | ||
| TCACACA<font color="red">CG</font>A<font color="red">GA</font>G | | TCACACA<font color="red">CG</font>A<font color="red">GA</font>G | ||
− | | | + | | 1500.04 |
|- | |- | ||
| BBa_K1725321 | | BBa_K1725321 | ||
| TCACACA<font color="red">GA</font>A<font color="red">GG</font>G | | TCACACA<font color="red">GA</font>A<font color="red">GG</font>G | ||
− | | | + | | 1203.18 |
|- | |- | ||
| BBa_K1725322 | | BBa_K1725322 | ||
| TCACACA<font color="red">AA</font>A<font color="red">GA</font>G | | TCACACA<font color="red">AA</font>A<font color="red">GA</font>G | ||
− | | | + | | 875.94 |
|- | |- | ||
| BBa_K1725323 | | BBa_K1725323 | ||
| TCACACA<font color="red">CA</font>A<font color="red">GA</font>G | | TCACACA<font color="red">CA</font>A<font color="red">GA</font>G | ||
− | | | + | | 875.94 |
|- | |- | ||
| BBa_K1725324 | | BBa_K1725324 | ||
| TCACACA<font color="red">GA</font>A<font color="red">GA</font>G | | TCACACA<font color="red">GA</font>A<font color="red">GA</font>G | ||
− | | | + | | 875.94 |
|- | |- | ||
| BBa_K1725325 | | BBa_K1725325 | ||
| TCACACA<font color="red">TA</font>A<font color="red">GA</font>G | | TCACACA<font color="red">TA</font>A<font color="red">GA</font>G | ||
− | | | + | | 875.94 |
|- | |- | ||
| BBa_K1725326 | | BBa_K1725326 | ||
| TCACACA<font color="red">AG</font>A<font color="red">AA</font>G | | TCACACA<font color="red">AG</font>A<font color="red">AA</font>G | ||
− | | | + | | 355.35 |
|- | |- | ||
| BBa_K1725327 | | BBa_K1725327 | ||
| TCACACA<font color="red">AA</font>A<font color="red">AA</font>G | | TCACACA<font color="red">AA</font>A<font color="red">AA</font>G | ||
− | | | + | | 271.26 |
|- | |- | ||
| BBa_K1725328 | | BBa_K1725328 | ||
| TCACACA<font color="red">CA</font>A<font color="red">AA</font>G | | TCACACA<font color="red">CA</font>A<font color="red">AA</font>G | ||
− | | | + | | 271.26 |
|- | |- | ||
| BBa_K1725329 | | BBa_K1725329 | ||
| TCACACA<font color="red">GA</font>A<font color="red">AA</font>G | | TCACACA<font color="red">GA</font>A<font color="red">AA</font>G | ||
− | | | + | | 271.26 |
|- | |- | ||
| BBa_K1725330 | | BBa_K1725330 | ||
| TCACACA<font color="red">TA</font>A<font color="red">AA</font>G | | TCACACA<font color="red">TA</font>A<font color="red">AA</font>G | ||
− | | | + | | 271.26 |
|- | |- | ||
| BBa_K1725331 | | BBa_K1725331 | ||
| TCACACA<font color="red">TG</font>A<font color="red">AA</font>G | | TCACACA<font color="red">TG</font>A<font color="red">AA</font>G | ||
− | | | + | | 271.26 |
|- | |- | ||
| BBa_K1725332 | | BBa_K1725332 | ||
| TCACACA<font color="red">CG</font>A<font color="red">AA</font>G | | TCACACA<font color="red">CG</font>A<font color="red">AA</font>G | ||
− | | | + | | 158.07 |
|} | |} | ||
Revision as of 15:46, 18 September 2015
Member of the RBS library - derived from BBa_B0032
Parts K1725301-K1725332 are members of ribosome binding site library derived from Anderson-family RBS B0032 (BBa_B0032). All 32 sequences were obtained by randomised PCR.
Identifier | Sequence | Estimated strength (au) |
---|---|---|
Degenerate sequence | TCACACANRARRG | |
BBa_K1725301 | TCACACAGGAGGG | 15730.86 |
BBa_K1725302 | TCACACAGGAGAG | 12493.41 |
BBa_K1725303 | TCACACAGGAAGG | 8716.05 |
BBa_K1725304 | TCACACAAGAGGG | 7247.43 |
BBa_K1725305 | TCACACAAGAAGG | 5532.39 |
BBa_K1725306 | TCACACACGAGGG | 3880.58 |
BBa_K1725307 | TCACACATGAGGG | 3880.58 |
BBa_K1725308 | TCACACAAAAAGG | 2574.21 |
BBa_K1725309 | TCACACAAAAGGG | 2574.21 |
BBa_K1725310 | TCACACACAAAGG | 2574.21 |
BBa_K1725311 | TCACACACAAGGG | 2574.21 |
BBa_K1725312 | TCACACAGAAAGG | 2574.21 |
BBa_K1725313 | TCACACATAAAGG | 2574.21 |
BBa_K1725314 | TCACACATAAGGG | 2574.21 |
BBa_K1725315 | TCACACATGAAGG | 2574.21 |
BBa_K1725316 | TCACACACGAAGG | 2352.63 |
BBa_K1725317 | TCACACAGGAAAG | 2161.77 |
BBa_K1725318 | TCACACAAGAGAG | 1969.19 |
BBa_K1725319 | TCACACATGAGAG | 1506.8 |
BBa_K1725320 | TCACACACGAGAG | 1500.04 |
BBa_K1725321 | TCACACAGAAGGG | 1203.18 |
BBa_K1725322 | TCACACAAAAGAG | 875.94 |
BBa_K1725323 | TCACACACAAGAG | 875.94 |
BBa_K1725324 | TCACACAGAAGAG | 875.94 |
BBa_K1725325 | TCACACATAAGAG | 875.94 |
BBa_K1725326 | TCACACAAGAAAG | 355.35 |
BBa_K1725327 | TCACACAAAAAAG | 271.26 |
BBa_K1725328 | TCACACACAAAAG | 271.26 |
BBa_K1725329 | TCACACAGAAAAG | 271.26 |
BBa_K1725330 | TCACACATAAAAG | 271.26 |
BBa_K1725331 | TCACACATGAAAG | 271.26 |
BBa_K1725332 | TCACACACGAAAG | 158.07 |
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]