Difference between revisions of "Part:BBa K1813006"
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<partinfo>BBa_K1813006 short</partinfo>
 
<partinfo>BBa_K1813006 short</partinfo>
  
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nicC
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<i>nicC</i> Gen Bank accession no.:  (Q88FY2.1).
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<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>
 
<partinfo>BBa_K1813006 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K1813006 SequenceAndFeatures</partinfo>
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<h2>Background of <i>nicC</i></h2>
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<h4>Part Description:</h4>
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<p>Codon optimized coding sequence of <i>nicC</i>, an enzyme from the ''Pseudmonas putida'' bacterium KT2240, for E.Coli. This composite part was used to make our part <a href="https://parts.igem.org/Part:BBa_K1813006">BBa_K1813006</a>. </p>
  
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<h4>Part Origin:</h4>
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<p>Originally cloned and characterized by Jimenez et al. from Pseudmonas putida KT2240 (1).</p>
  
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<h4>Part Function:</h4>
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===Functional Parameters===
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<p>The enzyme coded for by ''nicC'' converts 6-Hydroxynicitinoic acid (6-HNA) to 2,5-dihydroxypyridine (2,5-DHP).</p>
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<partinfo>BBa_K1813006 parameters</partinfo>
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<h4>References:</h4>
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Jose I. Jimenez, Angeles Canales, Jesus Jimenez-Barbero, et al. (2008)Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440. PNAS 105(32): doi10.1073/pnas.0802273105

Revision as of 05:55, 18 September 2015

nicC

nicC Gen Bank accession no.: (Q88FY2.1).


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 244
  • 1000
    COMPATIBLE WITH RFC[1000]

Background of nicC

Part Description:

Codon optimized coding sequence of nicC, an enzyme from the ''Pseudmonas putida'' bacterium KT2240, for E.Coli. This composite part was used to make our part BBa_K1813006.

Part Origin:

Originally cloned and characterized by Jimenez et al. from Pseudmonas putida KT2240 (1).

Part Function:

The enzyme coded for by ''nicC'' converts 6-Hydroxynicitinoic acid (6-HNA) to 2,5-dihydroxypyridine (2,5-DHP).

References:

Jose I. Jimenez, Angeles Canales, Jesus Jimenez-Barbero, et al. (2008)Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440. PNAS 105(32): doi10.1073/pnas.0802273105