Difference between revisions of "Part:BBa K1789000"
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===Experimental Validation=== | ===Experimental Validation=== | ||
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This part is tested together with the part BBa_K1789001, | This part is tested together with the part BBa_K1789001, | ||
<partinfo>BBa_K1789000 parameters</partinfo> | <partinfo>BBa_K1789000 parameters</partinfo> | ||
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Revision as of 03:42, 18 September 2015
IaaM
This part is the coding sequence of tryptophan-2-mono-oxygenase.
Usage and Biology
Indole-3-acetic acid (IAA), also known as auxin, is a plant hormone, which can promote growth and protect the soil from erosion. IAA can be synthesized through IAM pathway, originated from Pseudomonas savastanoi. Two important enzymes are contained in this pathway, AKA IaaM and IaaH.
IaaM is the tryptophan-2-mono-oxygenase. This enzyme catalyzes the oxidative carboxylation of L-tryptophan to indole-3-acetamide. IaaH is the indoleacetimide hydrolase. This enzyme catalyses the hydrolysis of indoleacetamide to indoleacetate and ammonia. This pathway is relevantly easy to be expressed in prokaryotic cells, and its substrate (Trp) can be synthesized by host cells.
Sequence and Features
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 402
Illegal BamHI site found at 1347 - 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 109
- 1000COMPATIBLE WITH RFC[1000]
Experimental Validation
This part is validated through three ways: enzyme cutting, PCR, Sequence, and functional testing
This part is tested together with the part BBa_K1789001,