Difference between revisions of "Part:BBa I742130:Experience"
(→‎Glasgow 2014 experience)
 
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It gave a lower fluorescence than our designed reverse RBS [https://parts.igem.org/Part:BBa_K1463560 BBa_K1463560].
 
It gave a lower fluorescence than our designed reverse RBS [https://parts.igem.org/Part:BBa_K1463560 BBa_K1463560].
  
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[[Image:reverse-rbs-rfp.jpg|thumb|500px|center|'''Fig. 1:''' Red fluorescence of colonies containing BBa_I742130 or K1463560 reversed RBSs "downstream" of the reversed rfp gene [https://parts.igem.org/Part:BBa_K1463520 BBa_K1463520] transcribed from the PhiC31 integrase switch [https://parts.igem.org/Part:BBa_K1463000 K1463000]]]
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[[Image:reverse-rbs-rfp.jpg|thumb|500px|center|'''Fig. 1:''' Red fluorescence of colonies containing [https://parts.igem.org/Part:BBa_K1463560 BBa_K1463560] or [https://parts.igem.org/Part:BBa_I742130 BBa_I742130] reversed RBSs "downstream" of the reversed rfp gene [https://parts.igem.org/Part:BBa_K1463520 BBa_K1463520] transcribed from the PhiC31 integrase switch [https://parts.igem.org/Part:BBa_K1463000 BBa_K1463000]. The image was scanned using a GE Healthcare Typhoon FLA9500 using the 532 nm laser and LPG filter.]]
  
 
Consistent with this result, BBa_I742130 had a lower predicted translation initiation rate than BBa_K1463560 as calculated by the Salis RBS calculator.
 
Consistent with this result, BBa_I742130 had a lower predicted translation initiation rate than BBa_K1463560 as calculated by the Salis RBS calculator.

Latest revision as of 22:03, 16 October 2014

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Applications of BBa_I742130

Glasgow 2014 experience

We tested this reversed RBS in TOP10 and DH5alpha cells upstream (OK downstream) of our reversed RFP (Red Fluorescent Protein) biobrick BBa_K1463520. This can be seen in Fig. 1 below.

It gave a lower fluorescence than our designed reverse RBS BBa_K1463560.


Fig. 1: Red fluorescence of colonies containing BBa_K1463560 or BBa_I742130 reversed RBSs "downstream" of the reversed rfp gene BBa_K1463520 transcribed from the PhiC31 integrase switch BBa_K1463000. The image was scanned using a GE Healthcare Typhoon FLA9500 using the 532 nm laser and LPG filter.

Consistent with this result, BBa_I742130 had a lower predicted translation initiation rate than BBa_K1463560 as calculated by the Salis RBS calculator.

BBa_I742130 calculated translation initiation rate 495.33

BBa_K1463560 calculated translation initiation rate 12,204.43

User Reviews

UNIQ686a1a28ebe8a064-partinfo-00000000-QINU UNIQ686a1a28ebe8a064-partinfo-00000001-QINU