Difference between revisions of "Part:BBa K1467400"
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The colonies containing the RFP part are clearly red in color under natural light after about 18 hours. Smaller colonies are visibly red under UV. The RFP part does not contain a degradation tag and the RBS is strong. When the flipper reaction is successful the colonies become white as the RFP sequence is replaced by the new part. No part of the BsaI recognition sequence will remain between the BioBrick suffix and the new part. | The colonies containing the RFP part are clearly red in color under natural light after about 18 hours. Smaller colonies are visibly red under UV. The RFP part does not contain a degradation tag and the RBS is strong. When the flipper reaction is successful the colonies become white as the RFP sequence is replaced by the new part. No part of the BsaI recognition sequence will remain between the BioBrick suffix and the new part. | ||
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| + | == NRP-UEA 2015 == | ||
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| + | At NRP-UEA we aim to produce a prebiotic of acylated/butrylated starch in plants. To do this, we had to infiltrate our constructs into plants. It was for this reason, along with the fact that we have a range of expertise on site, that we decided to work with GoldenGate cloning. The problem this posed, however, was when we wanted to send our constructs to the iGEM registry at the end of the project, they would be in the wrong backbone and not following the iGEM requirements. For all of our composite parts, we used the GoldenGate Module Flipper to easily convert our constructs into BioBrick compatible composite constructs. | ||
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Revision as of 11:59, 17 September 2015
RFP coding device - Golden Gate Module Flipper
This part is a "GoldenGate Flipper" that can be used to assemble complete transcriptional units from GoldenGate MoClo Standard Parts producing a standard BioBrick. It consists of the RFP reporter (from BBa_J04450) flanked by an inverted pair of BsaI recognition sequences. The image below shows the sequences inserted (in orange) between the RFP and the BioBrick prefix and suffix that enable the flipper to accept the parallel assembly of multiple MoClo parts in a one-step digestion-ligation Golden Gate cloning reaction.
The colonies containing the RFP part are clearly red in color under natural light after about 18 hours. Smaller colonies are visibly red under UV. The RFP part does not contain a degradation tag and the RBS is strong. When the flipper reaction is successful the colonies become white as the RFP sequence is replaced by the new part. No part of the BsaI recognition sequence will remain between the BioBrick suffix and the new part.
NRP-UEA 2015
At NRP-UEA we aim to produce a prebiotic of acylated/butrylated starch in plants. To do this, we had to infiltrate our constructs into plants. It was for this reason, along with the fact that we have a range of expertise on site, that we decided to work with GoldenGate cloning. The problem this posed, however, was when we wanted to send our constructs to the iGEM registry at the end of the project, they would be in the wrong backbone and not following the iGEM requirements. For all of our composite parts, we used the GoldenGate Module Flipper to easily convert our constructs into BioBrick compatible composite constructs.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 793
Illegal AgeI site found at 905 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 1082
Illegal BsaI.rc site found at 6