Difference between revisions of "Part:BBa K864401"

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The protein was first extracted and characterized in (Shkrob et. al., 2005) under the name aeCP597. This version is codon optimized for E.''coli''
 
The protein was first extracted and characterized in (Shkrob et. al., 2005) under the name aeCP597. This version is codon optimized for E.''coli''
  
Shkrob et. al. reported that the sum of the following substitutions compared to wild-type resulted in a far-red-shifted but radiation sensitive fluorescent protein:
+
Shkrob et. al. reported that the sum of the following substitutions compared to wild-type resulted in a far-red-shifted but radiation sensitive fluorescent protein: (K6T, K7E. Y101S, C143S, M146I, S158A)
  
K6T<br>
+
These following substitutions induced a more thermostable and photostable product than the above product: (S3P, V19I, Y101S, M146I, N168D)
K7E<br>
+
Y101S<br>
+
C143S<br>
+
M146I<br>
+
S158A<br>
+
 
+
These following substitutions induced a more thermostable and photostable product than the above product
+
 
+
S3P<br>
+
V19I<br>
+
Y101S<br>
+
M146I<br>
+
N168D<br>
+
  
  

Revision as of 00:20, 26 September 2012

aeBlue blue chromoprotein

aeBlue is a blue chromoprotein extracted from the basal disk of a beadlet anemone Actinia equina. The protein has an absorption maximum at 597nm and a deep blue colour. The protein aeBlue is of the GFP family with significant sequence similarities.

Source

The protein was first extracted and characterized in (Shkrob et. al., 2005) under the name aeCP597. This version is codon optimized for E.coli

Shkrob et. al. reported that the sum of the following substitutions compared to wild-type resulted in a far-red-shifted but radiation sensitive fluorescent protein: (K6T, K7E. Y101S, C143S, M146I, S158A)

These following substitutions induced a more thermostable and photostable product than the above product: (S3P, V19I, Y101S, M146I, N168D)


References

[http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1316306/]Shkrob, M.A., Yanushevich, Y.G., Chudakov, D.M., Gurskaya, N.G., Labas, Y.A., Poponov, S.Y., Mudrik, N.N., Lukyanov, S., Lukyanov, K.A., 2005. Far-red fluorescent proteins evolved from a blue chromoprotein from Actinia equina. Biochem. J. 392, 649–654.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]