Difference between revisions of "Part:pSB1C3"
Line 7: Line 7:
  
 
pSB1C3 has terminators bracketing its MCS which are designed to prevent transcription from *inside* the MCS from reading out into the vector. The efficiency of these terminators is known to be < 100%. Ideally we would construct a future set of terminators for bracketing a MCS that were 100% efficient in terminating both into and out of the MCS region.  
 
pSB1C3 has terminators bracketing its MCS which are designed to prevent transcription from *inside* the MCS from reading out into the vector. The efficiency of these terminators is known to be < 100%. Ideally we would construct a future set of terminators for bracketing a MCS that were 100% efficient in terminating both into and out of the MCS region.  
 +
  
 
===Usage and Biology===
 
===Usage and Biology===
  
−
In Spring 2011, pSB1C3 was sequenced using several primers. The current sequence reflects the most recent version (pSB1C3 w/ BBa_J04450, located in SP 4000 Well 2A).
+
In Spring 2011, pSB1C3 was sequenced using several primers. The current sequence reflects the most recent sequencing of pSB1C3 (w/ BBa_J04450, located in SP 4000 Well 2A).
 +
 
  
 
<!-- -->
 
<!-- -->

Revision as of 18:05, 4 May 2011

High copy BioBrick assembly plasmid

pSB1C3 is a high copy number plasmid (RFC 10) carrying chloramphenicol resistance.

The replication origin is a pUC19-derived pMB1 (copy number of 100-300 per cell).

pSB1C3 has terminators bracketing its MCS which are designed to prevent transcription from *inside* the MCS from reading out into the vector. The efficiency of these terminators is known to be < 100%. Ideally we would construct a future set of terminators for bracketing a MCS that were 100% efficient in terminating both into and out of the MCS region.


Usage and Biology

In Spring 2011, pSB1C3 was sequenced using several primers. The current sequence reflects the most recent sequencing of pSB1C3 (w/ BBa_J04450, located in SP 4000 Well 2A).


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2049
    Illegal SpeI site found at 2
    Illegal PstI site found at 16
    Illegal NotI site found at 9
    Illegal NotI site found at 2055
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2049
    Illegal XhoI site found at 1033
    Illegal XhoI site found at 1925
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal prefix found at 2049
    Illegal suffix found at 2
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal prefix found at 2049
    Plasmid lacks a suffix.
    Illegal XbaI site found at 2064
    Illegal SpeI site found at 2
    Illegal PstI site found at 16
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.