Difference between revisions of "Part:BBa K404208"
 
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__NOTOC__
 
__NOTOC__
 
<partinfo>BBa_K404208 short</partinfo>
 
<partinfo>BBa_K404208 short</partinfo>
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{| style="color:black" cellpadding="6" cellspacing="1" border="2" align="left"
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! colspan="2" style="background:#66bbff;"|[https://parts.igem.org/Part:BBa_K404208 ViralBrick-587-Bla]
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|-
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|'''BioBrick Nr.'''
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|[https://parts.igem.org/Part:BBa_K404208 BBa_K404208]
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|-
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|'''RFC standard'''
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|[https://parts.igem.org/Help:Assembly_standard_25 RFC 25]
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|-
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|'''Requirement'''
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|pSB1C3<br>
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|-
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|'''Source'''
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|
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|-
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|'''Submitted by'''
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|[http://2010.igem.org/Team:Freiburg_Bioware FreiGEM 2010]
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|}
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<br/><br/><br/><br/><br/><br/><br/><br/><br/><br/><br/><br/><br/>
 
[[Image:Freiburg10_ViralBrick-logo-587-BLA.png|thumb|center|480px]]<br>
 
[[Image:Freiburg10_ViralBrick-logo-587-BLA.png|thumb|center|480px]]<br>
  
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<!-- Add more about the biology of this part here
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<!-- Add more about the biology of this part here -->
 
===Usage and Biology===
 
===Usage and Biology===
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<html>
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<div style="width:965px; height:400px; ">
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<div style="float:left; width:460px; height:auto;  margin: 0px 5px 0px 5px; text-align:justify;">
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ß-Lactamase (BLA) is an enzyme produced by some bacteria that cleaves the ß-lactam ring of various antibiotics such as penicillin, rendering them inactive. Because the peptides' N- and C-termini are in close proximity to each other, we created a ViralBrick containing BLA to see if capsid assembly still takes place with such a large insert in place.
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Assembled capsids can easily be detected by a beta-lactamase assay.
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</div>
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</html>
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<br><br><br><br><br><br>
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===Restriction sites===
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<table border="1" style="float:right; width:480px; height:auto;>
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<tr>
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  <th><b>Restriction site</b></th>
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  <th><b>Enzyme</b></th>
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  <th><b>Recognition sequence</b></th>
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  <th><b>Activity</b></th>
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  <th><b>Temp.</b></th>
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</tr>
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<tr>
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  <td>upstream 587</td>
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  <td>[http://www.neb.com/nebecomm/products/productR3136.asp BamHI-HF]</td>
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  <td>[[image:Freiburg10_recognition site BamHI-HF.Gif]]</td>
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  <td>100;50;10;100</td>
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  <td>37°C</td>
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</tr>
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<tr>
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  <td>downstream 587</td>
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  <td>[http://www.neb.com/nebecomm/products/productR3151.asp PvuII-HF]</td>
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  <td>[[image:Freiburg10_recognition site PvuII-HF.Gif]]</td>
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  <td>0;25;0;100</td>
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  <td>37°C
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</tr>
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<tr>
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</table>
  
 
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Latest revision as of 02:44, 28 October 2010

ViralBrick-587-Beta Lactamase (BLA)

ViralBrick-587-Bla
BioBrick Nr. BBa_K404208
RFC standard RFC 25
Requirement pSB1C3
Source
Submitted by [http://2010.igem.org/Team:Freiburg_Bioware FreiGEM 2010]














Freiburg10 ViralBrick-logo-587-BLA.png

Usage and Biology

ß-Lactamase (BLA) is an enzyme produced by some bacteria that cleaves the ß-lactam ring of various antibiotics such as penicillin, rendering them inactive. Because the peptides' N- and C-termini are in close proximity to each other, we created a ViralBrick containing BLA to see if capsid assembly still takes place with such a large insert in place. Assembled capsids can easily be detected by a beta-lactamase assay.







Restriction sites

Restriction site Enzyme Recognition sequence Activity Temp.
upstream 587 [http://www.neb.com/nebecomm/products/productR3136.asp BamHI-HF] Freiburg10 recognition site BamHI-HF.Gif 100;50;10;100 37°C
downstream 587 [http://www.neb.com/nebecomm/products/productR3151.asp PvuII-HF] Freiburg10 recognition site PvuII-HF.Gif 0;25;0;100 37°C

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 10
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]