Difference between revisions of "Part:BBa K5322002"

 
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==Usage and Biology==
 
==Usage and Biology==
 
<p>
 
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The plasmid pET29a-J23119-RBS-Mfp5-T7 utilizes the pET29a vector for high-level expression in <i>Escherichia coli</i>. This system is controlled by the strong constitutive promoter J23119, which regulates the expression of the mussel foot protein Mfp5. The ribosome binding site (RBS) ensures efficient translation of the mRNA, while the T7 terminator provides a clean and efficient termination for transcription. This system is designed for the effective expression of Mfp5 under conditions not influenced by environmental factors, allowing it to exhibit its adhesive properties.
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The plasmid pET29a-J23119-RBS-Mfp5-T7 utilizes the pET29a vector for high-level expression in <i>Escherichia coli</i>. This system is controlled by the strong constitutive promoter J23119, which regulates the expression of the mussel foot protein 5(Mfp5). The ribosome binding site (RBS) ensures efficient translation of the mRNA, while the T7 terminator provides a clean and efficient termination for transcription. This system is designed for the effective expression of Mfp5 under conditions not influenced by environmental factors, allowing it to exhibit its adhesive properties.
 
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<img src="https://static.igem.wiki/teams/5322/wet-lab/21-pet29a-j23119-rbs-mfp5-t7.png" alt="pET29a-J23119-RBS-Mfp5-T7" width="300">
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<img src="https://static.igem.wiki/teams/5322/wet-lab/21-pet29a-j23119-rbs-mfp5-t7.png" alt="pET29a-J23119-RBS-Mfp5-T7" width="600">
 
<p align="center"><b>Figure 2-1</b>  Plasmid pET29a-J23119-RBS-Mfp5-T7</p>
 
<p align="center"><b>Figure 2-1</b>  Plasmid pET29a-J23119-RBS-Mfp5-T7</p>
 
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<img src="https://static.igem.wiki/teams/5322/wet-lab/94-pcr-mfp5.png" alt="gel" width="500">
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<img src="https://static.igem.wiki/teams/5322/wet-lab/94-pcr-mfp5.png" alt="gel" width="600">
 
<p align="center"><b>Figure 2-2</b>  Colony PCR gel electrophoresis of plasmid pET29a-J23119-RBS-Mfp5-T7(512bp)</p>
 
<p align="center"><b>Figure 2-2</b>  Colony PCR gel electrophoresis of plasmid pET29a-J23119-RBS-Mfp5-T7(512bp)</p>
 
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==Protein Expression Validation==
 
==Protein Expression Validation==
 
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We verified the performance of the lysis module through dry experiments and plan to complete wet experimental validation of its lytic function in the future. Through literature review and numerical modeling validation, we found that after inducing the expression of antimicrobial peptides and lysis proteins with NO for twenty minutes, the engineered strain will be lysed by the lysis protein and release the antimicrobial peptides. Mathematical modeling confirmed that at this time, the concentration of antimicrobial peptides is sufficient to reach an effective inhibitory concentration.  
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We characterized the protein through Tricine-SDS-PAGE and Western Blot experiments, confirming the expression of Mfp5,as shown in Figures 3-1 and 3-2. The size of J23119-Mfp3, including the His tag, is 9.8 kDa; however, based on the results from the gel and Western Blot, we observed a shift in the bands, which approximately appeared around the 13 kDa position. We hypothesize that the strong adhesive properties of Mfp5 may have slowed the protein migration rate, resulting in an upward shift of the band position and an apparent increase in the displayed protein size.
 
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<img src="https://static.igem.wiki/teams/5322/wet-lab/29-sds-mfp1.png" alt="SDS-PAGE" width="300">
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<img src="https://static.igem.wiki/teams/5322/wet-lab/29-sds-mfp1.png" alt="SDS-PAGE" width="600">
 
<p align="center"><b>Figure 3-1</b>  Tricine-SDS-PAGE analysis of Mfp5</p>
 
<p align="center"><b>Figure 3-1</b>  Tricine-SDS-PAGE analysis of Mfp5</p>
 
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<div class="center-img">
 
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<img src="https://static.igem.wiki/teams/5322/wet-lab/31-wb-mfp1.png" alt="WB" width="300">
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<img src="https://static.igem.wiki/teams/5322/wet-lab/31-wb-mfp1.png" alt="WB" width="600">
 
<p align="center"><b>Figure 3-2</b>  Western Blot analysis of Mfp5</p>
 
<p align="center"><b>Figure 3-2</b>  Western Blot analysis of Mfp5</p>
 
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==Sequence and Features==
 
==Sequence and Features==
 
<partinfo>BBa_K5322002 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K5322002 SequenceAndFeatures</partinfo>

Latest revision as of 03:11, 2 October 2024

Constitutive Mfp5 Expression System


Usage and Biology

The plasmid pET29a-J23119-RBS-Mfp5-T7 utilizes the pET29a vector for high-level expression in Escherichia coli. This system is controlled by the strong constitutive promoter J23119, which regulates the expression of the mussel foot protein 5(Mfp5). The ribosome binding site (RBS) ensures efficient translation of the mRNA, while the T7 terminator provides a clean and efficient termination for transcription. This system is designed for the effective expression of Mfp5 under conditions not influenced by environmental factors, allowing it to exhibit its adhesive properties.

Construction of the plasmid

To express eukaryotic proteins in prokaryotic systems, we chose Escherichia coli BL21(DE3) as the chassis cell, using the strong promoter J23119 as the regulatory element for efficient expression of the adhesive protein. As shown in Figure 2-1, we designed the plasmid pET29a-J23119-RBS-Mfp5-T7. The plasmid was transferred to BL21(DE3) via homologous recombination, and single colonies of E. coli were selected on several transformation plates for plasmid extraction. We performed PCR verification using specific primers targeting a 512 bp fragment, as illustrated in Figure 2-2. Plasmids with correctly positioned bands were sequenced, and the sequencing results in Figure 2-3 confirmed the successful construction of the plasmid pET29a-J23119-RBS-Mfp5-T7.

pET29a-J23119-RBS-Mfp5-T7

Figure 2-1 Plasmid pET29a-J23119-RBS-Mfp5-T7

gel

Figure 2-2 Colony PCR gel electrophoresis of plasmid pET29a-J23119-RBS-Mfp5-T7(512bp)

cexu

Figure 2-3 Sequencing results of plasmid pET29a-J23119-RBS-Mfp5-T7

Protein Expression Validation

We characterized the protein through Tricine-SDS-PAGE and Western Blot experiments, confirming the expression of Mfp5,as shown in Figures 3-1 and 3-2. The size of J23119-Mfp3, including the His tag, is 9.8 kDa; however, based on the results from the gel and Western Blot, we observed a shift in the bands, which approximately appeared around the 13 kDa position. We hypothesize that the strong adhesive properties of Mfp5 may have slowed the protein migration rate, resulting in an upward shift of the band position and an apparent increase in the displayed protein size.

SDS-PAGE

Figure 3-1 Tricine-SDS-PAGE analysis of Mfp5

WB

Figure 3-2 Western Blot analysis of Mfp5

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
    Illegal NheI site found at 300
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 137
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]