Difference between revisions of "Part:BBa K5301004"
 
(2 intermediate revisions by 2 users not shown)
Line 4: Line 4:
  
 
SpyCatcher comes from the spontaneous isopeptide bond domain in streptococcus pyogenes fibronectin-binding protein FbaB. It can cooperate with SpyTag to achieve covalent binding of proteins through Tag-Catcher interaction. The robust reaction conditions and irreversible linkage of SpyTag-Catcher provide a targetable lock in cells and a stable module for new protein architectures.
 
SpyCatcher comes from the spontaneous isopeptide bond domain in streptococcus pyogenes fibronectin-binding protein FbaB. It can cooperate with SpyTag to achieve covalent binding of proteins through Tag-Catcher interaction. The robust reaction conditions and irreversible linkage of SpyTag-Catcher provide a targetable lock in cells and a stable module for new protein architectures.
 +
 +
<center><html><img src='https://static.igem.wiki/teams/5301/parts/spytag-nw50-spycatcher.png' width='400px'></html></center>
 +
<center><html>Figure 1.Structure of Spycatcher-NW50-SpyTag protein extract.From this structure diagram, it is predicted that spytag and spycatcher can be successfully combined at both ends of the spNW50.
 +
</html></center>
  
 
<!-- Add more about the biology of this part here
 
<!-- Add more about the biology of this part here
Line 9: Line 13:
  
 
<!-- -->
 
<!-- -->
−
<span class='h3bb'>Sequence and Features</span>
+
<span class='h3bb'>
 +
===Sequence and Features===
 +
</span>
 
<partinfo>BBa_K5301004 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K5301004 SequenceAndFeatures</partinfo>
  
Line 23: Line 29:
  
 
In the design, we intend to use the robust reaction conditions and irreversible connections of SpyCatcher and SpyTag to link the two ends of the MSP protein, thereby enabling the formation of nanodiscs.
 
In the design, we intend to use the robust reaction conditions and irreversible connections of SpyCatcher and SpyTag to link the two ends of the MSP protein, thereby enabling the formation of nanodiscs.
−
In the experiment, we successfully characterized the NW50 [BBa_K5301015] protein with spytag and spycatcher, but their presence promoted the dimerization of the protein (Figure 1a). Through the engineering of iGEM24_BNU-China, we alleviated the dimerization problem and produced a monomeric protein with two tags (Figure 1bc).
+
In the experiment, we successfully characterized the NW50 [BBa_K5301015] protein with spytag and spycatcher, but their presence promoted the dimerization of the protein (Figure 2a). Through the engineering of iGEM24_BNU-China, we alleviated the dimerization problem and produced a monomeric protein with two tags (Figure 2bc).
  
 
<div class="center">
 
<div class="center">
Line 33: Line 39:
 
                     <a href="https://static.igem.wiki/teams/5301/parts/sds-results-of-nw50-dimerization-or-monomerization.png" class="internal" title="Enlarge"></a>
 
                     <a href="https://static.igem.wiki/teams/5301/parts/sds-results-of-nw50-dimerization-or-monomerization.png" class="internal" title="Enlarge"></a>
 
                 </div>
 
                 </div>
−
                 <b>Figure 1. SDS analysis of NW50 with Spycatcher results of dimerization(a) and monomerization(bc).</b>
+
                 <b>Figure 2. SDS analysis of spNW50 with Spycatcher results of dimerization(a) and monomerization(bc).</b>
 
                  
 
                  
 
             </div>
 
             </div>
Line 41: Line 47:
  
 
<h2>Conclusion</h2>
 
<h2>Conclusion</h2>
−
Finally, through electron microscope imaging, we determined that the nanodisc was successfully generated under the action of spytag and spycatcher(Figure 2).
+
Finally, through electron microscope imaging, we determined that the nanodisc was successfully generated under the action of spytag and spycatcher(Figure 3).
  
 
<div class="center">
 
<div class="center">
Line 51: Line 57:
 
                     <a href="https://static.igem.wiki/teams/5301/parts/nw50-electron-microscope-photograph-dls-result.png" class="internal" title="Enlarge"></a>
 
                     <a href="https://static.igem.wiki/teams/5301/parts/nw50-electron-microscope-photograph-dls-result.png" class="internal" title="Enlarge"></a>
 
                 </div>
 
                 </div>
−
                 <b>Figure 2. Electron microscopic images(a) and DLS particle size results(b) of nanodiscs by NW50 and Spycatcher. </b>
+
                 <b>Figure 3. Electron microscopic images(a) and DLS particle size results(b) of nanodiscs by spNW50 and Spycatcher. </b>
 +
               
 +
            </div>
 +
        </div>
 +
    </div>
 +
</div>
 +
 
 +
Furthermore, we employed a Fluorescent Inverted microscope to examine whether mCherry[1-10] successfully complemented mCherry[11] and emitted fluorescence (Figure 4). We observed the red fluorescence of mCherry under the Fluorescent Inverted microscope, demonstrating that they functioned successfully.
 +
 
 +
<div class="center">
 +
    <div class="thumb tnone">
 +
        <div class="thumbinner" style="width:50%;">
 +
            <a href="https://static.igem.wiki/teams/5301/parts/mcherry-fluorescence-observation-chart.jpg" class="image">
 +
                <img alt="" src="https://static.igem.wiki/teams/5301/parts/mcherry-fluorescence-observation-chart.jpg" width="100%" height=auto class="thumbimage" /></a>                  <div class="thumbcaption">
 +
                <div class="magnify">
 +
                    <a href="https://static.igem.wiki/teams/5301/parts/mcherry-fluorescence-observation-chart.jpg" class="internal" title="Enlarge"></a>
 +
                </div>
 +
                <b>Figure 4. The mCherry fluorescence observation chart (10×10) under green light excitation. It was observed using a fluorescent Inverted microscope and photographed with an ordinary mobile phone. </b>
 
                  
 
                  
 
             </div>
 
             </div>

Latest revision as of 04:18, 2 October 2024


SpyCatcher can achieve covalent binding of proteins through Tag-Catcher interaction.

SpyCatcher comes from the spontaneous isopeptide bond domain in streptococcus pyogenes fibronectin-binding protein FbaB. It can cooperate with SpyTag to achieve covalent binding of proteins through Tag-Catcher interaction. The robust reaction conditions and irreversible linkage of SpyTag-Catcher provide a targetable lock in cells and a stable module for new protein architectures.

Figure 1.Structure of Spycatcher-NW50-SpyTag protein extract.From this structure diagram, it is predicted that spytag and spycatcher can be successfully combined at both ends of the spNW50.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Characterization

In the design, we intend to use the robust reaction conditions and irreversible connections of SpyCatcher and SpyTag to link the two ends of the MSP protein, thereby enabling the formation of nanodiscs. In the experiment, we successfully characterized the NW50 [BBa_K5301015] protein with spytag and spycatcher, but their presence promoted the dimerization of the protein (Figure 2a). Through the engineering of iGEM24_BNU-China, we alleviated the dimerization problem and produced a monomeric protein with two tags (Figure 2bc).
Figure 2. SDS analysis of spNW50 with Spycatcher results of dimerization(a) and monomerization(bc).

Conclusion

Finally, through electron microscope imaging, we determined that the nanodisc was successfully generated under the action of spytag and spycatcher(Figure 3).
Figure 3. Electron microscopic images(a) and DLS particle size results(b) of nanodiscs by spNW50 and Spycatcher.
Furthermore, we employed a Fluorescent Inverted microscope to examine whether mCherry[1-10] successfully complemented mCherry[11] and emitted fluorescence (Figure 4). We observed the red fluorescence of mCherry under the Fluorescent Inverted microscope, demonstrating that they functioned successfully.
Figure 4. The mCherry fluorescence observation chart (10×10) under green light excitation. It was observed using a fluorescent Inverted microscope and photographed with an ordinary mobile phone.