Difference between revisions of "Part:BBa K3833007"
Cornelligem (Talk | contribs) |
Cornelligem (Talk | contribs) |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
<partinfo>BBa_K3833007 short</partinfo> | <partinfo>BBa_K3833007 short</partinfo> | ||
| − | Fibronectin is a glycoprotein found in the extracellular matrix. It binds to receptor proteins such as integrins, collagen, fibrin, and other proteins. Fibronectin plays a large role in cell adhesion, growth, and differentiation, and is crucial to wound healing. By integrating fibronectin into Scl2, scaffolds made of Scl2 can accommodate cells with fibronectin binding sites. | + | Fibronectin is a glycoprotein found in the extracellular matrix. It binds to receptor proteins such as integrins, collagen, fibrin, and other proteins. Fibronectin plays a large role in cell adhesion, growth, and differentiation, and is crucial to wound healing [1]. By integrating fibronectin into Scl2, scaffolds made of Scl2 can accommodate cells with fibronectin binding sites. |
| + | |||
| + | Our team used PCR to amplify our composite Scl2 with fibronectin binding domain gBlock with our custom primers. After amplification, a gel electrophoresis was run on the PCR product using 1Kb Plus DNA Ladder. A significant band was obtained for the PCR, around 1,400bp (Img 1). Because we predicted this composite part to be 1,394 bp, it was determined that amplification of our Scl2 with fibronectin binding domain successfully occurred. | ||
| + | |||
| + | [[File:Fibronectin Gel.png|300px|center|thumb|Img 1. Gel Electrophoresis (1Kb Plus Ladder) of Part:BBa_K3833007 — Scl2 with Fibronectin Binding Domain PCR Product]] | ||
| + | |||
| + | References | ||
| + | |||
| + | [1] To, W.S., Midwood, K.S. Plasma and cellular fibronectin: distinct and independent functions during tissue repair. Fibrogenesis Tissue Repair 4, 21 (2011). https://doi.org/10.1186/1755-1536-4-21 | ||
| + | |||
<!-- Add more about the biology of this part here | <!-- Add more about the biology of this part here | ||
Latest revision as of 20:16, 21 October 2021
Scl2 with Fibronectin Binding Domain
Fibronectin is a glycoprotein found in the extracellular matrix. It binds to receptor proteins such as integrins, collagen, fibrin, and other proteins. Fibronectin plays a large role in cell adhesion, growth, and differentiation, and is crucial to wound healing [1]. By integrating fibronectin into Scl2, scaffolds made of Scl2 can accommodate cells with fibronectin binding sites.
Our team used PCR to amplify our composite Scl2 with fibronectin binding domain gBlock with our custom primers. After amplification, a gel electrophoresis was run on the PCR product using 1Kb Plus DNA Ladder. A significant band was obtained for the PCR, around 1,400bp (Img 1). Because we predicted this composite part to be 1,394 bp, it was determined that amplification of our Scl2 with fibronectin binding domain successfully occurred.
References
[1] To, W.S., Midwood, K.S. Plasma and cellular fibronectin: distinct and independent functions during tissue repair. Fibrogenesis Tissue Repair 4, 21 (2011). https://doi.org/10.1186/1755-1536-4-21
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal PstI site found at 397
Illegal PstI site found at 406
Illegal PstI site found at 415
Illegal PstI site found at 469 - 12INCOMPATIBLE WITH RFC[12]Illegal PstI site found at 397
Illegal PstI site found at 406
Illegal PstI site found at 415
Illegal PstI site found at 469 - 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 207
- 23INCOMPATIBLE WITH RFC[23]Illegal PstI site found at 397
Illegal PstI site found at 406
Illegal PstI site found at 415
Illegal PstI site found at 469 - 25INCOMPATIBLE WITH RFC[25]Illegal PstI site found at 397
Illegal PstI site found at 406
Illegal PstI site found at 415
Illegal PstI site found at 469
Illegal NgoMIV site found at 517
Illegal NgoMIV site found at 751
Illegal NgoMIV site found at 1300
Illegal AgeI site found at 1307 - 1000COMPATIBLE WITH RFC[1000]