Difference between revisions of "Template:BioE140LSpr09-Silver"

 
(2 intermediate revisions by one other user not shown)
Line 2: Line 2:
 
<blockquote style="background: PeachPuff; border: 1px solid rgb(153, 153, 153); padding: 1em;">
 
<blockquote style="background: PeachPuff; border: 1px solid rgb(153, 153, 153); padding: 1em;">
 
==Silver Binding Assay==
 
==Silver Binding Assay==
 
</blockquote>
 
  
 
Silver Binding Assay – Characterization of AG4 composite parts<br>
 
Silver Binding Assay – Characterization of AG4 composite parts<br>
Line 41: Line 39:
 
14. Pellet the cells <br>
 
14. Pellet the cells <br>
 
15. Measure absorbance of supernatant.The supernatant was tested for absorbance using spectroscopy on a TECAN set to measure the wavelength range 350nm-750nm at 10nm intervals.<br>
 
15. Measure absorbance of supernatant.The supernatant was tested for absorbance using spectroscopy on a TECAN set to measure the wavelength range 350nm-750nm at 10nm intervals.<br>
[[Image:silverbinding.jpg|200px]]]<br>
+
[[Image:silverbinding.jpg|300px]]<br>
[[Image:Example.jpg]]
+
[[Image:Control.JPG|200px]] [[Image:Construct11.JPG|200px]] [[Image:Construct12.JPG|200px]] [[Image:Construct13.JPG|200px]] [[Image:Construct14.JPG|200px]] [[Image:Construct15.JPG|200px]] [[Image:Construct16.JPG|200px]] [[Image:Construct17.JPG|200px]]
 +
</blockquote>

Latest revision as of 05:45, 21 May 2009

Silver Binding Assay

Silver Binding Assay – Characterization of AG4 composite parts

Information

Control: pBca9145-Bca1363

Composite Parts:
11: {Pbad.rbs.prepro.StrepTag}{<AG4>}{<CPG_L6!}{dblTerm}<br>
12: {Pbad.rbs.prepro.StrepTag}{<AG4>}{<eCPX!}{dblTerm}<br>
13: {Pbad.rbs.prepro.StrepTag}{<AG4>}{<upaG_short!}{dblTerm}<br>
14: {Pbad.rbs.prepro.StrepTag}{<AG4>}{<Ag43_short!}{dblTerm}<br>
15: {Pbad.rbs.prepro.StrepTag}{<AG4>}{<espP(beta)!}{dblTerm}<br>
16: {Pbad.rbs.prepro.StrepTag}{<AG4>}{<ehaB!]{dblTerm}<br>
17: {Pbad.rbs.prepro.StrepTag}{<AG4>}{<CPompX!}{dblTerm}<br>

LB: ampicillin and kanamycin

Conditions: pH 7.4 TBS. Ambient light. Constant agitation. Silver Nitrate (AgNO3) does not react with LB or TBS at dilute concentrations.

Protocol

Pick and Incubate Colonies

1. Add 4mL of LB media with the appropriate antibiotics and arabinose
2. Pick a well-isolated, round, and "normal" looking colony containing the silver binding peptide with a pipet tip
3. Drop it in the test tube
4. Incubate at 37C overnight

Wash cells and incubate in AgNO3

5. Pellet 1 mL of saturated culture by spinning full speed, 30 seconds.
6. Dump supernatant, repeat to pellet another 1 mL (for a total of 2 mL)
7. Pour out the supernatant (contains extracellular proteins, unneeded nutrients)
8. Add 200uL of TBS (pH 7.4) and resuspend
9. Centrifuge the colony solution for 30 seconds
10. Pour out the supernatant
11. Add TBS and 0.1mM AgNO3, and resuspend
12. Incubate at room temperature for 24hours
13. Observe color

Measure Absorbance using Spectrophotomer

14. Pellet the cells
15. Measure absorbance of supernatant.The supernatant was tested for absorbance using spectroscopy on a TECAN set to measure the wavelength range 350nm-750nm at 10nm intervals.
Silverbinding.jpg
Control.JPG Construct11.JPG Construct12.JPG Construct13.JPG Construct14.JPG Construct15.JPG Construct16.JPG Construct17.JPG