Difference between revisions of "Part:BBa K3002010"
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+ | This basic part contains the sequence of the sp20 3xHA-tag (B5) and was built as a part of the Kaiser Collection. Combined with a secretion signal of the Kaiser Collection like <a href="https://parts.igem.org/Part:BBa_K3002007">BBa_K3002007</a> (cCA (B2)), <a href="https://parts.igem.org/Part:BBa_K3002008">BBa_K3002008</a> (GLE (B2)) or <a href="https://parts.igem.org/Part:BBa_K3002009">BBa_K3002009</a> (ARS (B2)), an appropriate promoter (<a href="https://parts.igem.org/Part:BBa_K3002001">BBa_K3002001</a> (PSAD promoter (A1-B1)) or <a href="https://parts.igem.org/Part:BBa_K3002031">BBa_K3002031</a> (PAR promoter (A1-B1))) and terminator (e.g. <a href="https://parts.igem.org/Part:BBa_K3002006">BBa_K3002006</a> (RPL23 terminator)) your target protein is secreted efficiently and can be detected via HA-antibody (<a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5552477/">Ramos-Martinez, 2017</a>). | ||
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+ | <img src="https://2019.igem.org/wiki/images/0/0a/T--TU_Kaiserslautern--resultsFigure8.svg"/> | ||
+ | <p class="caption"><span class="phat">The SP20 module increases the efficiency of protein secretion. | ||
+ | </span><span class="accent">(a)</span> Level 2 MoClo constructs harboring the aadA selection marker, and the coding sequences for MUT-PETase and MHETase equipped with the secretion signals introduced in Figure 6. The constructs contain the coding sequence for a conventional 3xHA tag (C, K, L)(<a href="https://parts.igem.org/Part:BBa_K3002202">BBa_K3002202</a>, <a href="https://parts.igem.org/Part:BBa_K3002210">BBa_K3002210</a>, <a href="https://parts.igem.org/Part:BBa_K3002211">BBa_K3002211</a>), or the 3xHA tag preceded by a SP20 tag to enhance glycosylation (M, N, O). See Figure 1 for the description of other parts. <span class="accent">(b)</span> UVM4 transformants containing the constructs C, K, L and M, N, O (<a href="https://parts.igem.org/Part:BBa_K3002202">BBa_K3002202</a>, <a href="https://parts.igem.org/Part:BBa_K3002210">BBa_K3002210</a>, <a href="https://parts.igem.org/Part:BBa_K3002211">BBa_K3002211</a>, <a href="https://parts.igem.org/Part:BBa_K3002212">BBa_K3002212</a>, <a href="https://parts.igem.org/Part:BBa_K3002213">BBa_K3002213</a>, <a href="https://parts.igem.org/Part:BBa_K3002214">BBa_K3002214</a>) were grown in TAP medium for seven days. Cells were centrifuged and the supernatant lyophilized, resuspended in 2xSDS buffer and analyzed by SDS-PAGE and immunoblotting with an anti-HA antibody. Transformant A27 introduced in Figures 4, served as positive control. The black arrow points to MHETase, the white arrow to MUT-PETase and the grey arrow to RPL1 (chloroplast ribosomal 50S protein L1). The RPL1 antibody was used to detect contamination from intracellular proteins. | ||
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<img src="https://2019.igem.org/wiki/images/5/58/T--TU_Kaiserslautern--resultsFigure9.svg"/> | <img src="https://2019.igem.org/wiki/images/5/58/T--TU_Kaiserslautern--resultsFigure9.svg"/> |
Latest revision as of 22:48, 13 December 2019
Sp20 HA tag for Chlamydomonas reinhardtii (Phytobrick)
This basic part contains the sequence of the sp20 3xHA-tag (B5) and was built as a part of the Kaiser Collection. Combined with a secretion signal of the Kaiser Collection like BBa_K3002007 (cCA (B2)), BBa_K3002008 (GLE (B2)) or BBa_K3002009 (ARS (B2)), an appropriate promoter (BBa_K3002001 (PSAD promoter (A1-B1)) or BBa_K3002031 (PAR promoter (A1-B1))) and terminator (e.g. BBa_K3002006 (RPL23 terminator)) your target protein is secreted efficiently and can be detected via HA-antibody (Ramos-Martinez, 2017).
The SP20 HA tag leads to glycosylation and enhance the secretion of the enzymes MUT-PETase and MHETase significantly. It was crucial to secrete the MUT-PETase. The glycosylation worked very well but might influence the activity of the proteins.
The Kaiser Collection
We are proud to present our very own MoClo part collection for C. reinhardtii - the Kaiser collection.
These 20 Parts are specifically designed and codon optimized for Chlamydomonas. Among them are regulatory elements, antibiotic resistances, resistance cassettes, secretion signals and tags. These parts were tested and optimized thoroughly and we can guarantee that they work 100%. With these, expression and secretion in Chlamy will be a success. Because this is a MoClo collection, the parts are highly standardized for worldwide application. The combination with other part collections works fast and easy. While in MoClo, nomenclature is a bit different from the iGEM BioBricks, it is quickly explained:
Level 0 parts are equivalent to basic parts, e.g. Promoters, coding sequences, etc.
Level 1 parts are combinations of basic parts and usually form functional transcription units.
Level 2 parts are combinations of Level 1 parts, in case you want to transfer multiple transcription units at once. For example, you can pair your gene of interest with a selection marker.
The great thing about the Kaiser Collection and MoClo is that the ligation works in a one pot, one step reaction, as the Type IIs restriction enzymes cut out their own recognition sites. This way, multiple constructs can be combined linearly in a fixed order to create complex structures. This is ensured by the standardized overlaps that assign the parts one of 10 positions in the final constructs. After trying MoClo once, you won’t go back to traditional ligation. It is incredibly easy and reliable. For this reason, we believe that our Kaiser Collection will strike a significant chord, as the future lies in standardized, easy to use methods such as MoClo. Visit our part collection site to get an overview over all parts of the Kaiser Collection
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]