Difference between revisions of "Part:BBa K3165051"

 
 
(3 intermediate revisions by the same user not shown)
Line 4: Line 4:
  
 
This part encodes for the N-terminal T7 RNA Polymerase domain attached to the nMag photo-sensitive unit via linker sequence under a ribosome binding site with a double terminator.
 
This part encodes for the N-terminal T7 RNA Polymerase domain attached to the nMag photo-sensitive unit via linker sequence under a ribosome binding site with a double terminator.
−
 
−
<!-- Add more about the biology of this part here
 
−
===Usage and Biology===
 
  
 
<!-- -->
 
<!-- -->
−
<span class='h3bb'>Sequence and Features</span>
+
<span class='h3bb'><b>Sequence and Features</b></span>
 
<partinfo>BBa_K3165051 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K3165051 SequenceAndFeatures</partinfo>
  
 +
===Usage and Biology===
 +
 +
The T7 DNA-dependent RNA Polymerase is commonly used for protein expression due to its high processivity and high selectivity for T7 promoter. Bacterial RNA Polymerase cannot transcribe the genes under the T7 promoter, so under normal circumstances, the genes under the T7 promoter will not be transcribed and hence the gene product won't be synthesized (some lysogenic bacterial strains can produce the proteins under T7 expression).<br><br>
 +
Thus we can use the T7 expression system in our model organism for protein expression. Splitting up of the T7 RNA Polymerase into two separate domains, each linked to a photo-sensitive dimerizing unit is an effective means to regulate protein expression in a cell. Upon shining light of appropriate frequency (blue light for the T7 system), the photo-sensitive domains dimerize leading to the functional reactivity of the T7 RNA Polymerase. Upon stimulation, the T7 RNA Polymerase becomes functional and transcribes the genes downstream to the T7 promoter, providing a dynamic means to control protein expression.
 +
<br>
 +
This part has the N-terminal T7 RNAP and nMag protein under a strong RBS forming a functional translational unit. We can use this part in association with the other T7 domain (C-terminal domain) linked to the photo-sensitive pMag unit to create a blue light-sensitive system in the bacteria. The Opto T7 system to be incorporated into <i>Escherichia coli</i> utilises this part for its functioning.
  
 
<!-- Uncomment this to enable Functional Parameter display  
 
<!-- Uncomment this to enable Functional Parameter display  

Latest revision as of 13:24, 20 October 2019


(N-Terminal T7 RNAP Domain + nMag) Generator (for Escherichia coli)

This part encodes for the N-terminal T7 RNA Polymerase domain attached to the nMag photo-sensitive unit via linker sequence under a ribosome binding site with a double terminator.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 1681
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 904
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 1353

Usage and Biology

The T7 DNA-dependent RNA Polymerase is commonly used for protein expression due to its high processivity and high selectivity for T7 promoter. Bacterial RNA Polymerase cannot transcribe the genes under the T7 promoter, so under normal circumstances, the genes under the T7 promoter will not be transcribed and hence the gene product won't be synthesized (some lysogenic bacterial strains can produce the proteins under T7 expression).

Thus we can use the T7 expression system in our model organism for protein expression. Splitting up of the T7 RNA Polymerase into two separate domains, each linked to a photo-sensitive dimerizing unit is an effective means to regulate protein expression in a cell. Upon shining light of appropriate frequency (blue light for the T7 system), the photo-sensitive domains dimerize leading to the functional reactivity of the T7 RNA Polymerase. Upon stimulation, the T7 RNA Polymerase becomes functional and transcribes the genes downstream to the T7 promoter, providing a dynamic means to control protein expression.
This part has the N-terminal T7 RNAP and nMag protein under a strong RBS forming a functional translational unit. We can use this part in association with the other T7 domain (C-terminal domain) linked to the photo-sensitive pMag unit to create a blue light-sensitive system in the bacteria. The Opto T7 system to be incorporated into Escherichia coli utilises this part for its functioning.