Difference between revisions of "Part:BBa K2533055"
 
(3 intermediate revisions by 2 users not shown)
Line 3: Line 3:
 
<partinfo>BBa_K2533055 short</partinfo>
 
<partinfo>BBa_K2533055 short</partinfo>
  
−
Production and transport of lactic acid
+
L-lactate permease & D-lactate dehydrogenase
  
 
<h1>'''Usage and biology'''</h1>
 
<h1>'''Usage and biology'''</h1>
−
ldhA refers to fermentative D-lactate dehydrogenase, NAD-dependent, performing the conversion of pyruvate to D-lactate. In this way, Rhodopseudomonas palustris could produce lactate more efficiently, which brings Shewanella more carbon sources.
+
It encodes L-lactate permease and D-lactate dehydrogenase, which could produce and transport lactate. ldhA could convert pyruvate to D-lactate, lldP could transport lactate out of the cell. In this way, Rhodopseudomonas palustris could effciently transport produced lactate out of the cell, which later will be used by Shewanella.
  
 
<h1>'''Characterization'''</h1>
 
<h1>'''Characterization'''</h1>
−
This is one section for lactate utilization part.
+
This is one section for lactate production and transportation part.
−
[[File:T--HUST-China--2018-tonglu-ldhA-lldP.png ‎|400px|thumb|center|Figure1:RBS-ldhA-RBS-lldP-TT]]
+
[[File:T--HUST-China--2018-tonglu-ldhA-lldP.png ‎|400px|thumb|center|Figure1. RBS-ldhA-RBS-lldP-TT]]
  
 
<h2>DNA Gel Electrophoretic</h2>
 
<h2>DNA Gel Electrophoretic</h2>
−
To make sure that we get the target gene, we did DNA gel electrophoretic for verification. And here is the result.
+
To make sure that we get the target genes, we did DNA gel electrophoretic for verification. And here is the result.
−
[[File:T--HUST-China--2018-jiaotu-ldhA-lldP.png|400px|thumb|center|Figure2:Verification of successful transformation of pSB1C3-RBS-ldhA-RBS-lldP-TT]]
+
[[File:T--HUST-China--2018-jiaotu-ldhA-lldP.png|400px|thumb|center|Figure2. Verification of successful transformation of pSB1C3-RBS-ldhA-RBS-lldP-TT]]
 
Our target genes are 2739bp, and as the marker is DS5000, we could be sure that the bright bands in this picture are our target genes.
 
Our target genes are 2739bp, and as the marker is DS5000, we could be sure that the bright bands in this picture are our target genes.
  
 
<h2>Electrogenesis</h2>
 
<h2>Electrogenesis</h2>
−
By detecting the production of lactate after expressing protein, we might find out whether ldhA could effectively help Rhodopseudomonas palustris to produce more lactate.
+
By detecting the production of lactate after expressing, we might find out whether RBS-ldhA-RBS-lldP-tt could effectively help Rhodopseudomonas palustris produce more lactate.
−
[[File:T--HUST-China--2018-expression of lactate.png ‎|400px|thumb|center|Figure3:shows that our modification is effective. Every gene circuits can help strains produce lactate, and mleS-lldP-ldhA is the most efficient one. Therefore, our construction of gene circuits achieves the goal to help strains produce lactate.]]
+
[[File:T--HUST-China--2018-expression of lactate.png ‎|400px|thumb|center|Figure3. shows that our modification is effective. Every gene circuits can help strains produce lactate, and mleS-lldP-ldhA is the most efficient one. Therefore, our construction of gene circuits achieves the goal to help strains produce lactate.]]
−
It could be demonstrated that targeted genes could be expressed in the engineered cells. More lactate has been produced by engineered bacteria.
+
It could be demonstrated that the target genes could be expressed in the engineered cells. More lactate has been produced by engineered bacteria.
 
<!-- Uncomment this to enable Functional Parameter display  
 
<!-- Uncomment this to enable Functional Parameter display  
 
===Functional Parameters===
 
===Functional Parameters===
 
<partinfo>BBa_K2533030 parameters</partinfo>
 
<partinfo>BBa_K2533030 parameters</partinfo>
 
<!-- -->
 
<!-- -->

Latest revision as of 22:29, 17 October 2018


RBS-ldhA-RBS-lldP-TT

L-lactate permease & D-lactate dehydrogenase

Usage and biology

It encodes L-lactate permease and D-lactate dehydrogenase, which could produce and transport lactate. ldhA could convert pyruvate to D-lactate, lldP could transport lactate out of the cell. In this way, Rhodopseudomonas palustris could effciently transport produced lactate out of the cell, which later will be used by Shewanella.

Characterization

This is one section for lactate production and transportation part.

Figure1. RBS-ldhA-RBS-lldP-TT

DNA Gel Electrophoretic

To make sure that we get the target genes, we did DNA gel electrophoretic for verification. And here is the result.

Figure2. Verification of successful transformation of pSB1C3-RBS-ldhA-RBS-lldP-TT

Our target genes are 2739bp, and as the marker is DS5000, we could be sure that the bright bands in this picture are our target genes.

Electrogenesis

By detecting the production of lactate after expressing, we might find out whether RBS-ldhA-RBS-lldP-tt could effectively help Rhodopseudomonas palustris produce more lactate.

Figure3. shows that our modification is effective. Every gene circuits can help strains produce lactate, and mleS-lldP-ldhA is the most efficient one. Therefore, our construction of gene circuits achieves the goal to help strains produce lactate.

It could be demonstrated that the target genes could be expressed in the engineered cells. More lactate has been produced by engineered bacteria.