Difference between revisions of "User:Scmohr/Sample RNA Parts Gray Boxes"
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=Terminators=
 
=Terminators=
  
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=='''For Coding Sequences - Enzyme Example:'''==
+
=='''For RNA Sequences - Terminator Example:'''==
  
 
===<SPAN style= 'color:brown'>Box Heading:</span>===
 
===<SPAN style= 'color:brown'>Box Heading:</span>===
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===<SPAN style= 'color:brown'>Box Content:</span>===
 
===<SPAN style= 'color:brown'>Box Content:</span>===
  
−
'''NAME: <SPAN style= 'color:blue'>[Insert Link?]'''</span>
+
'''NAME: <SPAN style= 'color:blue'>[Insert Part Name with Link?]'''</span>
  
−
'''Nickname: AAT 1'''
+
'''Nickname: Omit?'''
  
 
'''Source of ''original'' DNA sequence:'''<SPAN style= 'color:blue'>  </span>
 
'''Source of ''original'' DNA sequence:'''<SPAN style= 'color:blue'>  </span>
  
−
*'''GenBank <SPAN style= 'color:blue'> n/a? </span>  
+
*'''GenBank <SPAN style= 'color:blue'> GenBank GI: ___________ ?''' </span>  
−
*'''Other: n/a'''
+
*'''Other: <SPAN style= 'color:blue'>Other: ___________ n/a?'''</span>
  
 
'''<SPAN style= 'color:blue'>Database link?''' </span>
 
'''<SPAN style= 'color:blue'>Database link?''' </span>
  
−
'''Biological Origin: <SPAN style= 'color:blue'> [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=4932&lvl=3&lin=f&keep=1&srchmode=1&unlock ''Saccharomyces cerevisiae]'''''</span>
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<SPAN style= 'color:blue'>'''3D-Structure (NDB_ID): ___________''' </span>
 +
 
 +
<SPAN style= 'color:blue'>'''Rfam entry: ___________'''
 +
 
 +
<SPAN style= 'color:blue'>'''Secondary-Structure Prediction Tools: ___________'''
 +
 +
<SPAN style= 'color:blue'>'''Biological Origin:[http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/] ___________'''</span>
  
 
'''Literature references (PubMed IDs):
 
'''Literature references (PubMed IDs):
−
<SPAN style= 'color:blue'>[http://www.ncbi.nlm.nih.gov/pubmed/8085822?dopt=Abstract '''PM 8085822,'''] [http://www.ncbi.nlm.nih.gov/pubmed/12937998?dopt=Abstract '''PM 12937998,'''] [http://www.ncbi.nlm.nih.gov/pubmed/17891501?dopt=Abstract '''PM 17891501''']</span>
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<SPAN style= 'color:blue'>[http://www.ncbi.nlm.nih.gov/pubmed/8085822?dopt=Abstract '''PM 8085822,'''] </span>
  
−
'''Designer: <SPAN style= 'color:blue'>[http://parts2.mit.edu/wiki/index.php/MIT_2006 Andre Green''']</span>
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'''Designer: <SPAN style= 'color:blue'> link to homepage or lab page''' </span>
  
−
[DISCLAIMER]
 
  
 
<SPAN style= 'color:red'>Note:</span> The database links in this box refer to reference information that may not ''exactly''  correspond to a given part, since by definition the parts have been engineered.
 
<SPAN style= 'color:red'>Note:</span> The database links in this box refer to reference information that may not ''exactly''  correspond to a given part, since by definition the parts have been engineered.

Latest revision as of 16:32, 21 July 2008

This box will include the information for terminators, promoters, RNA Binding Sites...


Terminators

For RNA Sequences - Terminator Example:

Box Heading:

INFORMATION LINKS FOR BBa_J45014

Box Content:

NAME: [Insert Part Name with Link?]

Nickname: Omit?

Source of original DNA sequence:

  • GenBank GenBank GI: ___________ ?
  • Other: Other: ___________ n/a?

Database link?

3D-Structure (NDB_ID): ___________

Rfam entry: ___________

Secondary-Structure Prediction Tools: ___________

Biological Origin:[http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/] ___________

Literature references (PubMed IDs): [http://www.ncbi.nlm.nih.gov/pubmed/8085822?dopt=Abstract PM 8085822,]

Designer: link to homepage or lab page


Note: The database links in this box refer to reference information that may not exactly correspond to a given part, since by definition the parts have been engineered.