Difference between revisions of "Part:BBa K2387029"
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Fluorescence is measured over time, and compared to fluorescene generated while using eYFP as a reporter <a href="https://parts.igem.org/Part:BBa_K23870232"> (BBa_K2387032)</a>. | Fluorescence is measured over time, and compared to fluorescene generated while using eYFP as a reporter <a href="https://parts.igem.org/Part:BBa_K23870232"> (BBa_K2387032)</a>. | ||
− | <div class="figure-center | + | <div class="figure-center"> |
− | <img class="figure-center | + | <img class="figure-center" src="https://static.igem.org/mediawiki/2017/b/b0/T--Wageningen_UR--CpxR_dimerization_eYFP_Venus.png" width="900"> |
<div class="figure-center-caption"> | <div class="figure-center-caption"> | ||
− | <b>Figure | + | <b>Figure 1:</b> CpxR dimerization visualized using eYFP (left) and mVenus (right), with L-arabinose concentration = 0.2% and different activator concentrations over time |
</div> | </div> | ||
</div> | </div> | ||
+ | <p> | ||
+ | More information can be found <a href="http://2017.igem.org/Team:Wageningen_UR/Results/SpecificVisualization">here</a> | ||
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Latest revision as of 12:54, 1 November 2017
CpxR-mVenus[1-157] and CpxR-mVenus[158-238] + araC/pBAD promoter
The [http://parts.igem.com/Part:BBa_K2387038 N-terminus of mVenus] and the [http://parts.igem.com/Part:BBa_K2387039 C-terminus of mVenus] are fused to Cpx response regulator [http://parts.igem.com/Part:BBa_K2387002 CpxR] in order to visualize the activation of the Cpx pathway. Upon activation of the Cpx pathway, CpxR gets phosphorylated by E. coli endogenous CpxA after which it can homodimerize. This protein-protein interaction can be visualized using BiFC, hence the fusion of mVenus[1-157] and mVenus[158-238]. The fusion is put under the control of the L-arabinose inducible araC/pBAD promoter. Strong RBS BBa_B0034 is used to regulate transcription.
CpxR-mVenus[1-157] and CpxR-mVenus[158-238] fusions were linked together using a [http://parts.igem.com/Part:BBa_K1486004 Flexible Linker] consisting of two times the amino acids GGGGS.
This part is used to visualize the activation of the Cpx pathway via Bimolecular Fluorescence Complementation by using the CpxR-CpxR interaction.
Usage and Biology
This BioBrick was used following this protocol. Fluorescence is measured over time, and compared to fluorescene generated while using eYFP as a reporter (BBa_K2387032).
More information can be found here
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 1205
- 21INCOMPATIBLE WITH RFC[21]Illegal BamHI site found at 1144
Illegal XhoI site found at 1283
Illegal XhoI site found at 2498 - 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 979
Illegal AgeI site found at 1694
Illegal AgeI site found at 2909 - 1000INCOMPATIBLE WITH RFC[1000]Illegal SapI site found at 961