Difference between revisions of "Part:BBa K354001"

Latest revision as of 05:11, 1 November 2017

PlcR-PapR - Gram+ve Quorum Peptide

The PlcR-PapR fusion peptide has been derived from the Bacillus cereus quorum signalling system. This group of Gram-positive bacteria employs the PlcR quorum system to initiate virulence factors under appropriate cell density conditions. Synthesized as a propeptide, this fusion molecule is exported from the cell via the secA pathway, cleaved by an extracellular protease and re-imported into the cell via an oligopeptide permease. Both the extracellular protease as well as olidopeptide permease are ubiquitous structures to the Gram-positive cell wall. A such, any gram-positive bacteria expressing the PlcR-PapR protein should be able to both process as well as import the activating form of the fusion peptide.

Sequence and Features

Assembly Compatibility:

10
COMPATIBLE WITH RFC[10]
12
COMPATIBLE WITH RFC[12]
21
COMPATIBLE WITH RFC[21]
23
COMPATIBLE WITH RFC[23]
25
COMPATIBLE WITH RFC[25]
1000
COMPATIBLE WITH RFC[1000]

Improvement:TMMU-China 2017

Author：Yizhen Xu

Summary：In this improvement, we splited this part into two parts that can be used in cell-cell communication.

From reference [1], the PlcR-PapR fusion peptide can activate gene expression without the PapR signal peptide. Because alteration of the export signal, this fusion peptide can not be exported and re-imported into the cell to activate the PlcR transcription factor. In our improvement, we provided two new parts. One is the PlcR protein (BBa_K2279002), the other is PapR signal peptide (BBa_K2279003). Combining these two new parts, we can build autoinduction system and Sender-Receiver Cells to enable cell-cell communication.

Reference

[1] Pomerantsev A.P., Pomerantseva O.M. & Leppla S.H. (2004), A Spontaneous Translational Fusion of Bacillus cereus PlcR and PapR Activates Transcription of PlcR-Dependant Genes in Bacillus anthracis via Binding with a Specific Palindromic Sequence. Infection and Immunity 72:5814-5823.

@@ Line 3: / Line 3: @@
 <partinfo>BBa_K354001 short</partinfo>
-The PlcR-PapR fusion peptide has been derived from the Bacillus cereus quorum signalling system. This group of Gram-positive bacteria employs the PlcR quorum system to initiate virulence factors under appropriate cell density conditions. Synthesized as a propeptide, this fusion molecule is exported from the cell via the secA pathway, cleaved by an extracellular protease and re-imported into the cell via an oligopeptide permease. Both the extracellular protease as well as olidopeptide permease are ubiquitous structures to the Gram-positive cell wall. A such, any gram-positive bacteria expressing the PlcR-PapR protein should be able to both process as well as import the activating form of the fusion peptide.
+The PlcR-PapR fusion peptide has been derived from the <i>Bacillus cereus</i> quorum signalling system. This group of Gram-positive bacteria employs the PlcR quorum system to initiate virulence factors under appropriate cell density conditions. Synthesized as a propeptide, this fusion molecule is exported from the cell via the secA pathway, cleaved by an extracellular protease and re-imported into the cell via an oligopeptide permease. Both the extracellular protease as well as olidopeptide permease are ubiquitous structures to the Gram-positive cell wall. A such, any gram-positive bacteria expressing the PlcR-PapR protein should be able to both process as well as import the activating form of the fusion peptide.
 <!-- Add more about the biology of this part here
@@ Line 11: / Line 11: @@
 <span class='h3bb'>Sequence and Features</span>
 <partinfo>BBa_K354001 SequenceAndFeatures</partinfo>
 ===Improvement:TMMU-China 2017===
 Author：Yizhen Xu
 Summary：In this improvement, we splited this part into two parts that can be used in cell-cell communication.
-From reference [1], the PlcR-PapR fusion peptide can activate gene expression without the PapR signal peptide. Because alteration of the export signal, this fusion peptide can not be exported and re-imported into the cell to activate the PlcR transcription factor. In our improvement, we provided two new parts. One is the PlcR protein (BBa_K2279002), the other is PapR signal peptide (BBa_K2279003). Combining these two new parts, we can build autoinduction system and Sender-Receiver Cells to enable cell-cell communication.
+From reference [1], the PlcR-PapR fusion peptide can activate gene expression without the PapR signal peptide. Because alteration of the export signal, this fusion peptide can not be exported and re-imported into the cell to activate the PlcR transcription factor. In our improvement, we provided two new parts. One is the PlcR protein ([https://parts.igem.org/Part:BBa_K2279002 BBa_K2279002]), the other is PapR signal peptide ([https://parts.igem.org/Part:BBa_K2279003 BBa_K2279003]). Combining these two new parts, we can build autoinduction system and Sender-Receiver Cells to enable cell-cell communication.
 ===Reference===
-[1] Pomerantsev A.P., Pomerantseva O.M. & Leppla S.H. (2004), A Spontaneous Translational Fusion of Bacillus cereus PlcR and PapR Activates Transcription of PlcR-Dependant Genes in Bacillus anthracis via Binding with a Specific Palindromic Sequence. Infection and Immunity 72:5814-5823.
+[1] Pomerantsev A.P., Pomerantseva O.M. & Leppla S.H. (2004), A Spontaneous Translational Fusion of <i>Bacillus cereus</i> PlcR and PapR Activates Transcription of PlcR-Dependant Genes in Bacillus anthracis via Binding with a Specific Palindromic Sequence. Infection and Immunity 72:5814-5823.
 <!-- Uncomment this to enable Functional Parameter display