Difference between revisions of "Part:BBa K1995024"
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==Ice nucleation protein (INP)== | ==Ice nucleation protein (INP)== | ||
We used INP to anchor GFP and BHG out of the outer membrane of E. coli, firstly increasing the probability of the meeting of BHG and heavy metal ions and secondly using the fluorescence quenching of GFP to detect the concentration of heavy metal ions. | We used INP to anchor GFP and BHG out of the outer membrane of E. coli, firstly increasing the probability of the meeting of BHG and heavy metal ions and secondly using the fluorescence quenching of GFP to detect the concentration of heavy metal ions. | ||
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Ice nucleation protein (INP) is an excretion surface protein. It is widely used for establishing germ surface display system. It contains an internal repeated domain (IRD) and an N-terminal anchoring domain (fig.1). Studies have shown that decrease the time of repetition of IRD can also get a better-off rate of displaying. So we decreased the time of repetition of IRD to reduce pressure of synthesis of E. coli. | Ice nucleation protein (INP) is an excretion surface protein. It is widely used for establishing germ surface display system. It contains an internal repeated domain (IRD) and an N-terminal anchoring domain (fig.1). Studies have shown that decrease the time of repetition of IRD can also get a better-off rate of displaying. So we decreased the time of repetition of IRD to reduce pressure of synthesis of E. coli. | ||
Latest revision as of 18:27, 15 October 2016
IHG (INP-N-GFP-HG)
Based on BBa_K1995000 (BHG), we added INP-N and GFP to the upstream of BHG. Using INP-N, we anchored GFP and BHG out of the outer membrane of E.coli in order to increase the binding efficiency and using GFP to detect the concentration of cupric and mercuric ions.
Ice nucleation protein (INP)
We used INP to anchor GFP and BHG out of the outer membrane of E. coli, firstly increasing the probability of the meeting of BHG and heavy metal ions and secondly using the fluorescence quenching of GFP to detect the concentration of heavy metal ions.
Ice nucleation protein (INP) is an excretion surface protein. It is widely used for establishing germ surface display system. It contains an internal repeated domain (IRD) and an N-terminal anchoring domain (fig.1). Studies have shown that decrease the time of repetition of IRD can also get a better-off rate of displaying. So we decreased the time of repetition of IRD to reduce pressure of synthesis of E. coli.
GFP reporter
GFP is an excellent reporter in synthetic biology. We add GFP into IHG for following functions:
① Initial survey of the expression of IHG.
② Detect the binding efficiency and other features of IHG.
③ Detect and measure the concentration of cupric and mercuric ions.
Binding heavy metals
We detect the binding efficiency of IHG and other parts and get the following chart. (Fig. 5)
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 429
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 1181
Illegal SapI.rc site found at 238