Difference between revisions of "Part:BBa K1921020"

 
 
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<partinfo>BBa_K1921020 short</partinfo>
 
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<partinfo>BBa_K1921020 parameters</partinfo>
 
<partinfo>BBa_K1921020 parameters</partinfo>
 
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 +
===Usage===
 +
As a cell wall protein, GCW21 is often used as an anchor protein in Pichia pastoris to display some protein on the surface. By fusing GCW21 with the PETase, it can be displayed on the outer of the yeast cell wall.  <br>
 +
By expressing the fusion protein , PETase ,which can degrade macromolecular polymers into monomerswas, expressed on the surface of Pichia pastoris,. And the whole cell catalyst for the degradation of PET was obtained. Have the PETase fixed on the cell wall, on the one hand can improve the stability of PETase, on the other hand, it is easy to control the degradation reaction of PET and PETase recycling. <br>
 +
 +
===Biology===
 +
GCW21 was gained from Pichia pastoris GS115.As one of the Glycosylphosphatidylinositoled cell wall proteins (GPI-CWPs), GCW21 is located in the outer layer of yeast cell wall, its C terminal is oligo mannose glycosylated. Subsequently, the mannose chain of GCW21 connect with the β-1,6 dextranomer of inner cell wall layer by forming covalent connection, thus, the GCW21 is fixed in the outer layer of the cell wall protein.<br>
 +
PETase was found from a kind of microorganism living on PET as the main carbon source. It can degrade macromolecular polymers into monomers. Surface display can reveal the protein whose gene code is coalescing the gene code of target protein or polypeptide with the counterpart of ankyrin on the surface of the host cell wall to harvest the whole cell catalyst. <br>
 +
 +
===Reference===
 +
[1] Kinoshita T, Fujiata M. Overview of GPI biosynthesis [J]. The enzymes. 2009;26:1-30.<br>
 +
[2] Orlean P, Mennon AK. Thematic review series: lipid posttranslational modifications. GPI anchoring of protein in yeast and mammalian cells, or: how we learned to stop worrying and love glycophospholipids [J]. Journal of lipid research.2007;48(5):993-1011.<br>
 +
[3] Mouyna I, Fontaine T, Vai M, et al. Glycosylphosphatidy linositol-anchored glucanosyltransferases play an active role in the biosynthesis of the fungal cell wall[J]. Journal of Biological Chemistry.2000;275(20):14882-14889.<br>
 +
[4]Shosuke Yoshida, Kazumi Hiraga, Toshihiko Takehana, Ikuo Taniguchi,Hironao Yamaji, Yasuhito Maeda, Kiyotsuna Toyohara,Kenji Miyamoto, Yoshiharu Kimura, Kohei Oda. A bacterium that degrades and assimilates poly(ethylene terephthalate) [J].science，2016（351）：1196-1199.<br>
 +
[5] DongHeng Guo, YanShan Xu, YaJun Kang et al (2016). Synthesis of octyl-β- d -glucopyranoside catalyzed by Thai rosewood β-glucosidase - displaying Pichia pastoris, in an aqueous/organic two-phase system[J]. Enzyme & Microbial Technology, 2016, 85:90–97.<br>
 +
 +
 +
===Surface display HPLC Results===
 +
<p style="text-align: center;">
 +
    https://static.igem.org/mediawiki/igem.org/0/0f/ProofTJU11.jpg<br>
 +
</p>
 +
<p style="text-align: center;">
 +
    https://static.igem.org/mediawiki/igem.org/e/e5/ProofTJU12.jpg<br>
 +
'''Figure 1.''' The activity of P. pastoris PETase-GCW21. a&b used the first group of yeast; c&d used the second of yeast; a&c:the activity in different yeasts'concentration under the best hour; b&d: the activity in different hours under the best concentration.
 +
</p>

Latest revision as of 07:25, 20 October 2016


PETase+linker.b+GCW21


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 1120
    Illegal AgeI site found at 1390
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 881


Usage

As a cell wall protein, GCW21 is often used as an anchor protein in Pichia pastoris to display some protein on the surface. By fusing GCW21 with the PETase, it can be displayed on the outer of the yeast cell wall. 
By expressing the fusion protein , PETase ,which can degrade macromolecular polymers into monomerswas, expressed on the surface of Pichia pastoris,. And the whole cell catalyst for the degradation of PET was obtained. Have the PETase fixed on the cell wall, on the one hand can improve the stability of PETase, on the other hand, it is easy to control the degradation reaction of PET and PETase recycling.

Biology

GCW21 was gained from Pichia pastoris GS115.As one of the Glycosylphosphatidylinositoled cell wall proteins (GPI-CWPs), GCW21 is located in the outer layer of yeast cell wall, its C terminal is oligo mannose glycosylated. Subsequently, the mannose chain of GCW21 connect with the β-1,6 dextranomer of inner cell wall layer by forming covalent connection, thus, the GCW21 is fixed in the outer layer of the cell wall protein.
PETase was found from a kind of microorganism living on PET as the main carbon source. It can degrade macromolecular polymers into monomers. Surface display can reveal the protein whose gene code is coalescing the gene code of target protein or polypeptide with the counterpart of ankyrin on the surface of the host cell wall to harvest the whole cell catalyst.

Reference

[1] Kinoshita T, Fujiata M. Overview of GPI biosynthesis [J]. The enzymes. 2009;26:1-30.
[2] Orlean P, Mennon AK. Thematic review series: lipid posttranslational modifications. GPI anchoring of protein in yeast and mammalian cells, or: how we learned to stop worrying and love glycophospholipids [J]. Journal of lipid research.2007;48(5):993-1011.
[3] Mouyna I, Fontaine T, Vai M, et al. Glycosylphosphatidy linositol-anchored glucanosyltransferases play an active role in the biosynthesis of the fungal cell wall[J]. Journal of Biological Chemistry.2000;275(20):14882-14889.
[4]Shosuke Yoshida, Kazumi Hiraga, Toshihiko Takehana, Ikuo Taniguchi,Hironao Yamaji, Yasuhito Maeda, Kiyotsuna Toyohara,Kenji Miyamoto, Yoshiharu Kimura, Kohei Oda. A bacterium that degrades and assimilates poly(ethylene terephthalate) [J].science，2016（351）：1196-1199.
[5] DongHeng Guo, YanShan Xu, YaJun Kang et al (2016). Synthesis of octyl-β- d -glucopyranoside catalyzed by Thai rosewood β-glucosidase - displaying Pichia pastoris, in an aqueous/organic two-phase system[J]. Enzyme & Microbial Technology, 2016, 85:90–97.


Surface display HPLC Results

ProofTJU11.jpg

ProofTJU12.jpg
Figure 1. The activity of P. pastoris PETase-GCW21. a&b used the first group of yeast; c&d used the second of yeast; a&c:the activity in different yeasts'concentration under the best hour; b&d: the activity in different hours under the best concentration.