Difference between revisions of "Part:BBa K1328000"
 
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Part:BBa_K1328000 (HXT1-CMVmini) is a glucose-sensitive promoter of yeast origin and shown to function in both yeast and human cells. Exclusively activated by high glucose concentrations.
 
Part:BBa_K1328000 (HXT1-CMVmini) is a glucose-sensitive promoter of yeast origin and shown to function in both yeast and human cells. Exclusively activated by high glucose concentrations.
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https://static.igem.org/mediawiki/2014/4/40/2014-HXT1%2BCMV-forget.png
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https://static.igem.org/mediawiki/2014/7/77/2014_thu_parts3.png
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Part HXT1+CMV is used as promoter for target gene under the regulation of glucose, consisting of HXT-1 promoter and CMV promoter.
 
Part HXT1+CMV is used as promoter for target gene under the regulation of glucose, consisting of HXT-1 promoter and CMV promoter.
  
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Expression of target gene under the control of HXT1-CMV promoter is induced by high concentration of glucose.
 
Expression of target gene under the control of HXT1-CMV promoter is induced by high concentration of glucose.
  
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[[File:Tsinghua_Project_Microbe_Fig_1.png|600px|thumb|alt=Alt|Figure 1.EGFP fluorescence observed in yeast cells cultured in a) %2 glucose, and b) 3% glycerol. c) Flow cytometry analysis: Cell count vs. EGFP intensity. Red: 2% glucose; Cyan: 3% glycerol.]]
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[[File:Tsinghua_Project_Microbe_Fig_2.png|600px|thumb|alt=Alt|Figure 2. Mean EGFP fluorescence measured by flow cytometry (FACS) in yeast cells, a) induced by different levels of glucose, and b) different incubation durations.]]
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[[File:Tsinghua_Project_Microbe_Fig_3.png|600px|thumb|alt=Alt|Figure 3. Flow cytometry analysis of glucose-induced EGFP expression in HEK293 cells cultured in various glucose concentrations and citrate (as non-glucose carbon source). Plotted is frequency vs. EGFP intensity.
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== The HXT-1 Promoter ==
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The HXT-1 promoter is a glucose-sensitive promoter derived from region -750 bp to -161 bp upstream of the S. cerevisiae Hexose Transporter 1(HXT-1) gene. In yeast, HXT-1 expression is positively regulated by glucose, and Ferrer-Martinez et al. characterized a minimal sequence between -750 bp and -161 bp upstream of the HXT-1 gene as the promoter region sufficient for glucose-sensitivity[1] (Henceforth referred to as the HXT-1 promoter).
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The function of the HXT-1 promoter relies on a specific glucose-sensing pathway in yeast, and although there is no known mammalian homologue, HXT-1 promoter has been shown to retain its glucose sensitivity in human fibroblast cells[1].
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In practice, the HXT-1 promoter works best as a hybrid promoter with a minimal-CMV (MIN) promoter attached downstream.
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== Constructing a Glucose Sensor ==
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We were able to clone the HXT-1 promoter (586 bp) from the S. cerevisiae genome, and ligate it to a 206 bp minimal CMV promoter. Together they compose a glucose-sensitive promoter capable of functioning in both mammalian cells and S. cerevisiae cells.
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We were surprised to learn there was no glucose-sensing promoter documented in the iGEM Parts Registry, therefore we submitted our glucose sensor as BioBrick BBa_K1328000 to the parts registry, hoping that other teams would benefit from our work.
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== Characterizing Glucose-Sensitivity ==
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Before we put our system to producing insulin in mammalian cells, we first tested its glucose-sensitivity in yeast and mammalian cells by using EGFP as a reporter, by culturing transfected mammalian/yeast cells in culture media with different glucose concentrations. Fluorescence microscopy and flow cytometry analysis would then reveal any differences between the experiment groups.
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Yeast
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To fully characterize glucose-sensitivity, yeast cells transfected with the HXT1-CMVmini-EGFP plasmid was cultured in glucose-free media (with 3% glycerol as carbon source). They were then incubated with different concentrations of glucose (0, 5 mM, 10 mM, 15 mM, 20 mM, 25 mM) for different durations (0.5 h, 1 h, 8 h).
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Both fluorescence microscopy (Fig. 1) and flow cytometry analysis (Fig. 2) showed a positive correlation between EGFP fluorescence and glucose concentrations, demonstrating high glucose-sensitivity (lower than 5 mM). Time course studies revealed no significant difference between longer and shorter incubation durations, suggesting a fast response rate (less than 30 min).
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HEK293 Cells
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HEK293 cells were transiently transfected with the HXT1-CMVmini-EGFP glucose-sensor/reporter plasmid, and cultured in glucose-deficient media. Different levels of glucose was then added to the cell cultures to induce EGFP expression. Cells were collected and subjected to FACS analysis. No significant EGFP signal change was observed along with increasing glucose levels, however GFP fluorescence was clearly visible under microscopic observation in all cases. We suspect this is due to HEK293 cells having a much lower glucose sensing threshold than yeast cells, and also caused by trace amount of glucose in the glucose-deficient media. This experiment will be repeated with glucose-free cell cultures and a weaker promoter than CMV-mini (which will be replaced with an even shorter 128 bp version.)
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== Glucose-Regulated Insulin Production ==
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After demonstrating the function of our glucose-sensor system, we will proceed to testing its capabilities in regulating insulin production in human cell lines. An Sensor-insulin plasmid has been constructed and we will be detecting insulin production and secretion with western blots against insulin.
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== Reference ==
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[1] Ferrer-Martı́nez, Andreu, et al. "A glucose response element from the S. cerevisiae hexose transporter HXT1 gene is sensitive to glucose in human fibroblasts." Journal of molecular biology 338.4 (2004): 657-667.
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[2] Strathdee, Craig A., Marilyn R. McLeod, and Jennifer R. Hall. "Efficient control of tetracycline-responsive gene expression from an autoregulated bi-directional expression vector." Gene 229.1 (1999): 21-29.
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[3] Baron, Udo, et al. "Co-regulation of two gene activities by tetracycline via a bidirectional promoter." Nucleic acids research 23.17 (1995): 3605.
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== Additional Documentation ==
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For full characterization of this part, visit Team Tsinghua 2014's project wiki:
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http://2014.igem.org/Team:Tsinghua/Project/Microbe
  
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For full characterization of this part, visit
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== Related Parts ==
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HXT1-CMVmini-EGFP-tADH1 (Part:BBa_K1328002) is a testable version for this part, using EGFP as a reporter.
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https://parts.igem.org/Part:BBa_K1328002

Latest revision as of 23:03, 17 October 2014

Part:BBa_K1328000 (HXT1-CMVmini) is a glucose-sensitive promoter of yeast origin and shown to function in both yeast and human cells. Exclusively activated by high glucose concentrations. 2014_thu_parts3.png Part HXT1+CMV is used as promoter for target gene under the regulation of glucose, consisting of HXT-1 promoter and CMV promoter.

HXT-1 is a low-affinity glucose transporter from Saccharomyces cerevisiae. There is a glucose response element in HXT-1 gene sensitive to glucose in human fibroblasts, which is used here as a glucose-dependent regulator.

Expression of target gene under the control of HXT1-CMV promoter is induced by high concentration of glucose.

Alt
Figure 1.EGFP fluorescence observed in yeast cells cultured in a) %2 glucose, and b) 3% glycerol. c) Flow cytometry analysis: Cell count vs. EGFP intensity. Red: 2% glucose; Cyan: 3% glycerol.



Alt
Figure 2. Mean EGFP fluorescence measured by flow cytometry (FACS) in yeast cells, a) induced by different levels of glucose, and b) different incubation durations.


Alt
Figure 3. Flow cytometry analysis of glucose-induced EGFP expression in HEK293 cells cultured in various glucose concentrations and citrate (as non-glucose carbon source). Plotted is frequency vs. EGFP intensity.


The HXT-1 Promoter

The HXT-1 promoter is a glucose-sensitive promoter derived from region -750 bp to -161 bp upstream of the S. cerevisiae Hexose Transporter 1(HXT-1) gene. In yeast, HXT-1 expression is positively regulated by glucose, and Ferrer-Martinez et al. characterized a minimal sequence between -750 bp and -161 bp upstream of the HXT-1 gene as the promoter region sufficient for glucose-sensitivity[1] (Henceforth referred to as the HXT-1 promoter).

The function of the HXT-1 promoter relies on a specific glucose-sensing pathway in yeast, and although there is no known mammalian homologue, HXT-1 promoter has been shown to retain its glucose sensitivity in human fibroblast cells[1].

In practice, the HXT-1 promoter works best as a hybrid promoter with a minimal-CMV (MIN) promoter attached downstream.



Constructing a Glucose Sensor

We were able to clone the HXT-1 promoter (586 bp) from the S. cerevisiae genome, and ligate it to a 206 bp minimal CMV promoter. Together they compose a glucose-sensitive promoter capable of functioning in both mammalian cells and S. cerevisiae cells.

We were surprised to learn there was no glucose-sensing promoter documented in the iGEM Parts Registry, therefore we submitted our glucose sensor as BioBrick BBa_K1328000 to the parts registry, hoping that other teams would benefit from our work.



Characterizing Glucose-Sensitivity

Before we put our system to producing insulin in mammalian cells, we first tested its glucose-sensitivity in yeast and mammalian cells by using EGFP as a reporter, by culturing transfected mammalian/yeast cells in culture media with different glucose concentrations. Fluorescence microscopy and flow cytometry analysis would then reveal any differences between the experiment groups.




Yeast

To fully characterize glucose-sensitivity, yeast cells transfected with the HXT1-CMVmini-EGFP plasmid was cultured in glucose-free media (with 3% glycerol as carbon source). They were then incubated with different concentrations of glucose (0, 5 mM, 10 mM, 15 mM, 20 mM, 25 mM) for different durations (0.5 h, 1 h, 8 h).


Both fluorescence microscopy (Fig. 1) and flow cytometry analysis (Fig. 2) showed a positive correlation between EGFP fluorescence and glucose concentrations, demonstrating high glucose-sensitivity (lower than 5 mM). Time course studies revealed no significant difference between longer and shorter incubation durations, suggesting a fast response rate (less than 30 min).


HEK293 Cells HEK293 cells were transiently transfected with the HXT1-CMVmini-EGFP glucose-sensor/reporter plasmid, and cultured in glucose-deficient media. Different levels of glucose was then added to the cell cultures to induce EGFP expression. Cells were collected and subjected to FACS analysis. No significant EGFP signal change was observed along with increasing glucose levels, however GFP fluorescence was clearly visible under microscopic observation in all cases. We suspect this is due to HEK293 cells having a much lower glucose sensing threshold than yeast cells, and also caused by trace amount of glucose in the glucose-deficient media. This experiment will be repeated with glucose-free cell cultures and a weaker promoter than CMV-mini (which will be replaced with an even shorter 128 bp version.)



Glucose-Regulated Insulin Production

After demonstrating the function of our glucose-sensor system, we will proceed to testing its capabilities in regulating insulin production in human cell lines. An Sensor-insulin plasmid has been constructed and we will be detecting insulin production and secretion with western blots against insulin.



Reference

[1] Ferrer-Martı́nez, Andreu, et al. "A glucose response element from the S. cerevisiae hexose transporter HXT1 gene is sensitive to glucose in human fibroblasts." Journal of molecular biology 338.4 (2004): 657-667. [2] Strathdee, Craig A., Marilyn R. McLeod, and Jennifer R. Hall. "Efficient control of tetracycline-responsive gene expression from an autoregulated bi-directional expression vector." Gene 229.1 (1999): 21-29. [3] Baron, Udo, et al. "Co-regulation of two gene activities by tetracycline via a bidirectional promoter." Nucleic acids research 23.17 (1995): 3605.

Additional Documentation

For full characterization of this part, visit Team Tsinghua 2014's project wiki: http://2014.igem.org/Team:Tsinghua/Project/Microbe

Related Parts

HXT1-CMVmini-EGFP-tADH1 (Part:BBa_K1328002) is a testable version for this part, using EGFP as a reporter. https://parts.igem.org/Part:BBa_K1328002