Difference between revisions of "Part:BBa K1352006:Experience"

 
(4 intermediate revisions by the same user not shown)
Line 6: Line 6:
  
 
===User Reviews===
 
===User Reviews===
 +
 
<!-- DON'T DELETE --><partinfo>BBa_K1352006 StartReviews</partinfo>
 
<!-- DON'T DELETE --><partinfo>BBa_K1352006 StartReviews</partinfo>
 
<!-- Template for a user review
 
<!-- Template for a user review
Line 18: Line 19:
 
<!-- End of the user review template -->
 
<!-- End of the user review template -->
 
<!-- DON'T DELETE --><partinfo>BBa_K1352006 EndReviews</partinfo>
 
<!-- DON'T DELETE --><partinfo>BBa_K1352006 EndReviews</partinfo>
 
 
Restriction digest + Gel electrophoresis
 
 
 
[[File:K1352006 amongst recombinants HindIII.PNG|600px|thumb|left|Figure 1]]
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Figure 1; a Xba1 + HindIII restriction digest screen of recombinants.  The recombinant which went on to become K1352006 is in lane 5.  The “L” lane is DNA marker (ladder).  The arrows are to highlight the distance travelled by the HindIII-negative recombinants.
 
 
 
 
 
 
 
 
 
 
 
 
 
[[K1352006 standard digest.PNG|600px|thumb|left|Figure 2]]
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Figure 2; a restriction digest verification of plasmid K1352006
 
 
For figure 2: the letters indicate the following:
 
 
L. 10,000bp – 500bp DNA marker “ladder”
 
 
N. K1352006 plasmid digested with no enzymes
 
 
E. K1352006 plasmid digested with EcoRI
 
 
X. K1352006 plasmid digested with XbaI
 
 
S. K1352006 plasmid digested with SpeI
 
 
P. K1352006 plasmid digested with PstI
 
 
EP. K1352006 plasmid digested with EcoRI and PstI
 
 
XS. K1352006 plasmid digested with XbaI and Spe1
 
 
DNA Sequencing
 
The recombinant plasmid was Sanger-sequenced with the following sequencing primers.  “G101” is a reverse primer, the rest are forward primers.
 
 
“G101” (attaccgcctttgagtgagc)
 
 
“G100” (tgccacctgacgtctaagaa)
 
 
“35 INP-SEQ 1” (ccgattcattaatgcagctgg)
 
 
“36 INP-SEQ 2” (gaggttgctgttgccgac)
 
 
“37 INP-SEQ 3” (ggtgtggaagccgacattc)
 
 
The plasmid insert was found to be exactly as desired.  Highlighted below is the MCS excerpt from the “G101” primer results (“G101” is a reverse primer which is why the sequence is in reverse complement).
 
 
 
Conclusions
 
The construct sequence was produced exactly as designed; the full FLAG-tag – with BglII and HindIII sites – is present at the N-terminus of the linker sequence after INP.  However, despite all this, possibly due to YFP’s C and N termini being on the same side of it, the FLAG-tag is not accessible to antibodies.
 

Latest revision as of 19:10, 13 October 2014

This experience page is provided so that any user may enter their experience using this part.
Please enter how you used this part and how it worked out.

Applications of BBa_K1352006

User Reviews

UNIQ15287e3fc6786826-partinfo-00000000-QINU UNIQ15287e3fc6786826-partinfo-00000001-QINU