Difference between revisions of "Template:HelpPage/SupportedStandards"

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===Supported Standards===
 
===Supported Standards===
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[http://dspace.mit.edu/handle/1721.1/45138 10]
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By supporting an assembly standard, the Registry software can detect and understand the assembly process for parts. This includes:
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[http://dspace.mit.edu/handle/1721.1/45139 12]
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*Detection of '''illegal restriction''' sites in a part's sequence
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[http://dspace.mit.edu/handle/1721.1/46747 21]
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*Recognizing '''assembly scars''' in composite parts
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[http://dspace.mit.edu/handle/1721.1/32535 23]
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*Identification of a '''sample's assembly standard''', through sequence verification of the sample's prefix and suffix
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[http://dspace.mit.edu/handle/1721.1/45140 25]
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**'''Remember''', a part can have many samples in the Registry's Repository. Those samples can be in plasmid backbones of different assembly standards.
  
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[https://parts.igem.org/partsdb/scars.cgi Registry Assembly Standard Page]
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View the [https://parts.igem.org/partsdb/scars.cgi Assembly Systems Page] to see exactly what the Registry software looks for in these supported assembly standards
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Click below to view the supported assembly standards as specified by their original RFC
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*10 - '''BioBrick''' - [http://dspace.mit.edu/handle/1721.1/45138 RFC Documentation]
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*12 - '''BioBrick 2''' - [http://dspace.mit.edu/handle/1721.1/45139 RFC Documentation]
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*21 - '''Berkeley/BglBricks''' - [http://dspace.mit.edu/handle/1721.1/46747 RFC Documentation]
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*23 - '''Silver Standard''' - [http://dspace.mit.edu/handle/1721.1/32535 RFC Documentation]
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*25 - '''Freiburg Standard''' - [http://dspace.mit.edu/handle/1721.1/45140 RFC Documentation]
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*1000 - '''MoClo'''

Latest revision as of 17:42, 19 June 2014

Supported Standards

By supporting an assembly standard, the Registry software can detect and understand the assembly process for parts. This includes:

  • Detection of illegal restriction sites in a part's sequence
  • Recognizing assembly scars in composite parts
  • Identification of a sample's assembly standard, through sequence verification of the sample's prefix and suffix
    • Remember, a part can have many samples in the Registry's Repository. Those samples can be in plasmid backbones of different assembly standards.


View the Assembly Systems Page to see exactly what the Registry software looks for in these supported assembly standards

Click below to view the supported assembly standards as specified by their original RFC

  • 10 - BioBrick - [http://dspace.mit.edu/handle/1721.1/45138 RFC Documentation]
  • 12 - BioBrick 2 - [http://dspace.mit.edu/handle/1721.1/45139 RFC Documentation]
  • 21 - Berkeley/BglBricks - [http://dspace.mit.edu/handle/1721.1/46747 RFC Documentation]
  • 23 - Silver Standard - [http://dspace.mit.edu/handle/1721.1/32535 RFC Documentation]
  • 25 - Freiburg Standard - [http://dspace.mit.edu/handle/1721.1/45140 RFC Documentation]
  • 1000 - MoClo