Difference between revisions of "Part:BBa K1150036"
 
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{| style="color:black" cellpadding="6" cellspacing="1" border="2" align="right"
 
{| style="color:black" cellpadding="6" cellspacing="1" border="2" align="right"
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! colspan="2" style="background:#FFBF00;"|COP1
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! colspan="2" style="background:#FFBF00;"|RNAimer (VEGF1 target)
 
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|-
 
|'''Function'''
 
|'''Function'''
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|interaction partner of
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|Targeting VEGF1 with Cas9
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+
−
UVR8,reacts to UVB light
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|-
 
|-
 
|'''Use in'''
 
|'''Use in'''
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|'''Backbone'''
 
|'''Backbone'''
 
|pSB1C3<br>  
 
|pSB1C3<br>  
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|-
 
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|'''Organism'''
 
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|''Arabidopsis thaliana''
 
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|-
 
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|'''Source'''
 
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|AG Weber, Freiburg
 
 
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|-
 
|'''Submitted by'''
 
|'''Submitted by'''
 
|[http://2013.igem.org/Team:Freiburg Freiburg 2013]
 
|[http://2013.igem.org/Team:Freiburg Freiburg 2013]
 
|}
 
|}
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This device derived from [https://parts.igem.org/Part:BBa_K1150034 BBa_K1150034] can be used in combination with all devices with [https://parts.igem.org/Part:BBa_K1150000 dCas9]. It contains a DNA sequence coding for a crRNA that binds complementary to VEGF1 target (TTAAAAGTCGGCTGGTAGCGGGGAGGATCG).
 +
 +
For more information about dCas9 devices [http://2013.igem.org/Team:Freiburg klick here].
  
 
==Biology and Usage==
 
==Biology and Usage==
  
 +
Freiburg 2013 used this plasmid to test the efficiency of target VEGF1 by activating or repressing a SEAP reporter gene.
  
 
<span class='h3bb'>
 
<span class='h3bb'>

Latest revision as of 22:32, 4 October 2013

uniCAS RNAimer to target VEGF1

RNAimer (VEGF1 target)
Function Targeting VEGF1 with Cas9
Use in Mammalians
RFC standard RFC 25
Backbone pSB1C3
Submitted by [http://2013.igem.org/Team:Freiburg Freiburg 2013]

This device derived from BBa_K1150034 can be used in combination with all devices with dCas9. It contains a DNA sequence coding for a crRNA that binds complementary to VEGF1 target (TTAAAAGTCGGCTGGTAGCGGGGAGGATCG).

For more information about dCas9 devices [http://2013.igem.org/Team:Freiburg klick here].

Biology and Usage

Freiburg 2013 used this plasmid to test the efficiency of target VEGF1 by activating or repressing a SEAP reporter gene.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 224
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 216

Literature