Difference between revisions of "Part:BBa K1111014:Design"
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<partinfo>BBa_K1111014 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K1111014 SequenceAndFeatures</partinfo>
  
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==Gibson Assembly Design ==
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''Insert:'' we amplified the streptavidin coding from the Biobrick BBa_K283010 designed by iGEM 2009 group HKU-HKBU.
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<br>''Backbone:'' Starting from the biobrick BBa_K523013 (INP fused with YFP), we amplified the whole sequence except the EYFP and added gibson overhang complementary to streptavidin ends.
  
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===Design Notes===
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==Primers==
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Gibson Assembly
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Streptavidin iGEM PCR :
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<br>5' <font color = #0000FF>ATGGCTGAAGCTGGTATCACC</font> 3'
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<br>5' <font color = #0000FF>TTAGGAAGCAGCGGACGGTTTAAC</font> 3'
  
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BBa_K523013 PCR :
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<br>Fw: 5' <font color = #0000FF>ACCAAAGTTAAACCGTCCGCTGCTTCT</font><font color= red>AACATATCATAACGGAGTGATCGCAATG</font> 3'
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<br>Rev: 5' <font color = #0000FF>CCAGGTGCCGGTGATACCAGCTTCAGCCAT</font><font color= red>AGATCCCGCCACGCTGCT</font> 3'
  
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==Source==
  
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===Source===
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Can be expressed in Escherichia Coli.
  
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Can be expressed in Escherichia Coli
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==References and acknowledgements==
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<br>Thanks to the '''iGEM team of Edinburgh 2011''' that designed the Biobrick BBa_K523013 [https://parts.igem.org/Part:BBa_K523013].
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===References===
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<br>Thanks to the '''iGEM 2009 group HKU-HKBU''' that designed the Biobrick BBa_K283010 [https://parts.igem.org/Part:BBa_K283010].

Latest revision as of 21:42, 2 October 2013

Ice Nucleation Protein fused to Streptavidin BBa_K283010


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 1649
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 1036
    Illegal AgeI site found at 1691
    Illegal AgeI site found at 1742
  • 1000
    COMPATIBLE WITH RFC[1000]

Gibson Assembly Design

Insert: we amplified the streptavidin coding from the Biobrick BBa_K283010 designed by iGEM 2009 group HKU-HKBU.
Backbone: Starting from the biobrick BBa_K523013 (INP fused with YFP), we amplified the whole sequence except the EYFP and added gibson overhang complementary to streptavidin ends.

Primers

Streptavidin iGEM PCR :
5' ATGGCTGAAGCTGGTATCACC 3'
5' TTAGGAAGCAGCGGACGGTTTAAC 3'

BBa_K523013 PCR :
Fw: 5' ACCAAAGTTAAACCGTCCGCTGCTTCTAACATATCATAACGGAGTGATCGCAATG 3'
Rev: 5' CCAGGTGCCGGTGATACCAGCTTCAGCCATAGATCCCGCCACGCTGCT 3'

Source

Can be expressed in Escherichia Coli.

References and acknowledgements


Thanks to the iGEM team of Edinburgh 2011 that designed the Biobrick BBa_K523013 [1].
Thanks to the iGEM 2009 group HKU-HKBU that designed the Biobrick BBa_K283010 [2].