Difference between revisions of "Part:BBa K1078000"
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== Mxr1 (methanol expression regulator 1) modified ==
 
== Mxr1 (methanol expression regulator 1) modified ==
  
  
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Mxr1 (methanol expression regulator 1) is a key regulator, at transcriptional level, of methanol metabolism in the methylotrophic yeast ''Pichia pastoris''. It is a transcriptional factor that binds upstream of the MUT (methanol utilizing) pathway and peroxisome biogenesis gene´s promoters using its zinc finger domain. Among the MUT genes is the AOX1 gene that is regulated by the pAOX1 promoter. The pAOX promoter is found three times in the registry of parts; Part:BBa_K431007, Part:BBa_K945000, BBa_I764001, it is use for heterologous protein expression in Pichia.  
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Mxr1 (methanol expression regulator 1) is a key regulator, at transcriptional level, of methanol metabolism in the methylotrophic yeast ''Pichia pastoris''. It is a transcriptional factor that binds upstream of the MUT (methanol utilizing) pathway and peroxisome biogenesis gene´s promoters using its zinc finger domain. Among the MUT genes is the AOX1 gene that is regulated by the P<sub>AOX1</sub> promoter. The P<sub>AOX1</sub> promoter is found three times in the registry of parts; Part:BBa_K431007, Part:BBa_K945000 and BBa_I764001; it is use for heterologous protein expression in Pichia.  
  
 
The 14-3-3 proteins are ubiquitous, and have important roles in controlling a wide variety of cellular processes, like gene expression, metabolism, cell cycle and apoptosis. These 14-3-3 proteins are involved in the carbon source-dependent regulation of Mxr1, which is inactive in ethanol and glycerol, but is active in methanol.  
 
The 14-3-3 proteins are ubiquitous, and have important roles in controlling a wide variety of cellular processes, like gene expression, metabolism, cell cycle and apoptosis. These 14-3-3 proteins are involved in the carbon source-dependent regulation of Mxr1, which is inactive in ethanol and glycerol, but is active in methanol.  
  
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Our submitted Mxr1 is mutated in order to NOT be repressed by methanol, as the original Mxr1 is. This is done by substituted the Ser215 of the protein with Ala, inactivating the 14-3-3 protein interaction (phosphorylation) with Mxr1. It is also smaller than the original Mxr1 because it was already reported that the major activation domain of Mxr1 is located into the first 400 amino acids.  
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Our submitted Mxr1 is mutated in order to NOT be repressed by ethanol, as the original Mxr1 is. This is done by substituted the Ser215 of the protein with Ala, inactivating the 14-3-3 protein interaction (phosphorylation) with Mxr1. It is also smaller than the original Mxr1 because it was already reported that the major activation domain of Mxr1 is located within the first 400 amino acids.  
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The modified Mxr1 is able to activate the  P<sub>AOX1</sub> promoter in ethanol, methanol or in a ethanol/methanol solution. This is useful for our biosensor design, which aims to detect levels of methanol above 2% in common alcoholic drinks (normally containing 10 to 60% ethanol). This will allow government to make a preliminary high-throughput screening of ethanol drinks tainted will methanol.
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===Usage and Biology===
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<span class='h3bb'>Sequence and Features</span>
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<partinfo>BBa_K1078000 SequenceAndFeatures</partinfo>
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The modified Mxr1 is able to activate the pAOX promoter in ethanol, glycerol and methanol. This is useful for our biosensor design, which aims to detect levels of methanol above 2% in common alcoholic drinks (normally containing 10 to 60% ethanol). This will allow the government to make a preliminary high-throughput screening of ethanol drinks tainted will methanol.
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<!-- Uncomment this to enable Functional Parameter display
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===Functional Parameters===
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<partinfo>BBa_K1078000 parameters</partinfo>
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Latest revision as of 18:36, 27 September 2013

Mxr1 (methanol expression regulator 1) modified

Mxr1 (methanol expression regulator 1) is a key regulator, at transcriptional level, of methanol metabolism in the methylotrophic yeast Pichia pastoris. It is a transcriptional factor that binds upstream of the MUT (methanol utilizing) pathway and peroxisome biogenesis gene´s promoters using its zinc finger domain. Among the MUT genes is the AOX1 gene that is regulated by the PAOX1 promoter. The PAOX1 promoter is found three times in the registry of parts; Part:BBa_K431007, Part:BBa_K945000 and BBa_I764001; it is use for heterologous protein expression in Pichia.

The 14-3-3 proteins are ubiquitous, and have important roles in controlling a wide variety of cellular processes, like gene expression, metabolism, cell cycle and apoptosis. These 14-3-3 proteins are involved in the carbon source-dependent regulation of Mxr1, which is inactive in ethanol and glycerol, but is active in methanol.

Our submitted Mxr1 is mutated in order to NOT be repressed by ethanol, as the original Mxr1 is. This is done by substituted the Ser215 of the protein with Ala, inactivating the 14-3-3 protein interaction (phosphorylation) with Mxr1. It is also smaller than the original Mxr1 because it was already reported that the major activation domain of Mxr1 is located within the first 400 amino acids.

The modified Mxr1 is able to activate the PAOX1 promoter in ethanol, methanol or in a ethanol/methanol solution. This is useful for our biosensor design, which aims to detect levels of methanol above 2% in common alcoholic drinks (normally containing 10 to 60% ethanol). This will allow government to make a preliminary high-throughput screening of ethanol drinks tainted will methanol.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 240
    Illegal XhoI site found at 137
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 430
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 179
    Illegal SapI.rc site found at 635