Difference between revisions of "Part:BBa K5322005"
(→Protein Expression Validation) |
|||
(5 intermediate revisions by 2 users not shown) | |||
Line 10: | Line 10: | ||
==Usage and Biology== | ==Usage and Biology== | ||
<p> | <p> | ||
− | The plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7 utilizes the pET29a vector for high-level expression in <i>Escherichia coli</i>. To achieve better intestinal mucosal repair effects in the high NO environment associated with enteritis, we employed the oxidative stress-responsive SoxR/SoxS promoter, targeted specifically at the inflamed intestinal region for therapeutic purposes. The expression of SoxR is controlled by the strong constitutive promoter J23119 | + | The plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7 utilizes the pET29a vector for high-level expression in <i>Escherichia coli</i>. To achieve better intestinal mucosal repair effects in the high NO environment associated with enteritis, we employed the oxidative stress-responsive SoxR/SoxS promoter, targeted specifically at the inflamed intestinal region for therapeutic purposes. The expression of SoxR is controlled by the strong constitutive promoter J23119. SoxR responds to NO and activates the SoxS promoter, thereby regulating the expression of the mussel foot protein Mfp3. The ribosome binding site (RBS) ensures efficient translation of mRNA, while the T7 terminator provides a clean and efficient end for transcription. This system is designed for the efficient expression of Mfp3 in the high NO environment of enteritis, enhancing its adhesive properties. |
</P> | </P> | ||
Line 16: | Line 16: | ||
<html> | <html> | ||
<p> | <p> | ||
− | Due to the absence of endotoxins in <i>Escherichia coli</i> Nissle 1917 (EcN), we chose to use EcN as the chassis cell to enhance safety. To efficiently express the adhesin, we selected the strong constitutive promoter J23119 as the regulatory element. To achieve better intestinal mucosal repair effects in the high NO environment associated with enteritis, we utilized the oxidative stress-responsive SoxR/SoxS promoter, targeting the inflamed intestinal region for treatment. As shown in Figure 2-1, we designed the plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7. Through homologous recombination, we integrated this plasmid into EcN and selected individual <i>E. coli</i> colonies from several transformation plates for plasmid extraction. We performed PCR verification using specific primers targeting a 1075 bp fragment, as illustrated in Figure 2-2. The plasmids with correctly positioned bands were subjected to sequencing. The sequencing results in Figure 2-3 confirmed the successful construction of the plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7. | + | Due to the absence of endotoxins in <i>Escherichia coli</i> Nissle 1917 (EcN), we chose to use EcN as the chassis cell to enhance safety. To efficiently express the adhesin, we selected the strong constitutive promoter J23119 as the regulatory element. To achieve better intestinal mucosal repair effects in the high NO environment associated with enteritis, we utilized the oxidative stress-responsive SoxR/SoxS promoter, targeting the inflamed intestinal region for treatment. As shown in Figure 2-1, we designed the plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7. Through homologous recombination, we integrated this plasmid into EcN and selected individual <i>E. coli</i> colonies from several transformation plates for plasmid extraction. We performed PCR verification using specific primers targeting a 1075 bp fragment, as illustrated in Figure 2-2. The plasmids with correctly positioned bands( Lane 1) were subjected to sequencing. The sequencing results in Figure 2-3 confirmed the successful construction of the plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7. |
</p> | </p> | ||
Line 25: | Line 25: | ||
</style> | </style> | ||
<div class="center-img"> | <div class="center-img"> | ||
− | <img src="https://static.igem.wiki/teams/5322/wet-lab/42-pet29a-j23119-soxr-t-psoxs-rbs-mfp3-t7.png" alt="pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7" width=" | + | <img src="https://static.igem.wiki/teams/5322/wet-lab/42-pet29a-j23119-soxr-t-psoxs-rbs-mfp3-t7.png" alt="pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7" width="600"> |
<p align="center"><b>Figure 2-1</b> Plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7</p> | <p align="center"><b>Figure 2-1</b> Plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7</p> | ||
</div> | </div> | ||
<div class="center-img"> | <div class="center-img"> | ||
− | <img src="https://static.igem.wiki/teams/5322/wet-lab/51-pcr-mfp22.png" alt="gel" width=" | + | <img src="https://static.igem.wiki/teams/5322/wet-lab/51-pcr-mfp22.png" alt="gel" width="600"> |
<p align="center"><b>Figure 2-2</b> Colony PCR gel electrophoresis of plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7(1075bp)</p> | <p align="center"><b>Figure 2-2</b> Colony PCR gel electrophoresis of plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7(1075bp)</p> | ||
</div> | </div> | ||
Line 43: | Line 43: | ||
==Protein Expression Validation== | ==Protein Expression Validation== | ||
<html> | <html> | ||
− | Given that the mussel adhesive proteins used in this study are intended for application in the treatment of mammalian enteritis, we selected 37°C, the temperature closest to body temperature, as the optimal induction temperature. The induction time was identified as a crucial factor influencing protein characterization. The recombinant strain EcN-pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7 was cultured until an | + | Given that the mussel adhesive proteins used in this study are intended for application in the treatment of mammalian enteritis, we selected 37°C, the temperature closest to body temperature, as the optimal induction temperature. The induction time was identified as a crucial factor influencing protein characterization. The recombinant strain EcN-pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7 was cultured until an OD<sub>600</sub> of 0.8 was reached,then sodium nitroprusside (SNP) was added to a final concentration of 100 μM for induction. The recombinant protein was expressed for 16 hours in the EcN strain, and detection was carried out using Tricine-SDS-PAGE, as shown in Figure 3-1.Finally, we performed a Western Blot, as shown in Figure 3-2, which confirmed that the NO-inducible Mfp3 can be expressed in a high NO environment. |
<style> | <style> | ||
.center-img { | .center-img { | ||
Line 50: | Line 50: | ||
</style> | </style> | ||
<div class="center-img"> | <div class="center-img"> | ||
− | <img src="https://static.igem.wiki/teams/5322/wet-lab/52-pcr-mfp23.png" alt="SDS-PAGE" width=" | + | <img src="https://static.igem.wiki/teams/5322/wet-lab/52-pcr-mfp23.png" alt="SDS-PAGE" width="600"> |
<p align="center"><b>Figure 3-1</b> Tricine-SDS-PAGE analysis of NO-Mfp3</p> | <p align="center"><b>Figure 3-1</b> Tricine-SDS-PAGE analysis of NO-Mfp3</p> | ||
</div> | </div> |
Latest revision as of 12:08, 2 October 2024
NO-inducible Mfp3 Expression System
Contents
Usage and Biology
The plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7 utilizes the pET29a vector for high-level expression in Escherichia coli. To achieve better intestinal mucosal repair effects in the high NO environment associated with enteritis, we employed the oxidative stress-responsive SoxR/SoxS promoter, targeted specifically at the inflamed intestinal region for therapeutic purposes. The expression of SoxR is controlled by the strong constitutive promoter J23119. SoxR responds to NO and activates the SoxS promoter, thereby regulating the expression of the mussel foot protein Mfp3. The ribosome binding site (RBS) ensures efficient translation of mRNA, while the T7 terminator provides a clean and efficient end for transcription. This system is designed for the efficient expression of Mfp3 in the high NO environment of enteritis, enhancing its adhesive properties.
Construction of the plasmid
Due to the absence of endotoxins in Escherichia coli Nissle 1917 (EcN), we chose to use EcN as the chassis cell to enhance safety. To efficiently express the adhesin, we selected the strong constitutive promoter J23119 as the regulatory element. To achieve better intestinal mucosal repair effects in the high NO environment associated with enteritis, we utilized the oxidative stress-responsive SoxR/SoxS promoter, targeting the inflamed intestinal region for treatment. As shown in Figure 2-1, we designed the plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7. Through homologous recombination, we integrated this plasmid into EcN and selected individual E. coli colonies from several transformation plates for plasmid extraction. We performed PCR verification using specific primers targeting a 1075 bp fragment, as illustrated in Figure 2-2. The plasmids with correctly positioned bands( Lane 1) were subjected to sequencing. The sequencing results in Figure 2-3 confirmed the successful construction of the plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7.
Figure 2-1 Plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7
Figure 2-2 Colony PCR gel electrophoresis of plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7(1075bp)
Figure 2-3 Sequencing results of plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7
Protein Expression Validation
Given that the mussel adhesive proteins used in this study are intended for application in the treatment of mammalian enteritis, we selected 37°C, the temperature closest to body temperature, as the optimal induction temperature. The induction time was identified as a crucial factor influencing protein characterization. The recombinant strain EcN-pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp3-T7 was cultured until an OD600 of 0.8 was reached,then sodium nitroprusside (SNP) was added to a final concentration of 100 μM for induction. The recombinant protein was expressed for 16 hours in the EcN strain, and detection was carried out using Tricine-SDS-PAGE, as shown in Figure 3-1.Finally, we performed a Western Blot, as shown in Figure 3-2, which confirmed that the NO-inducible Mfp3 can be expressed in a high NO environment.
Figure 3-1 Tricine-SDS-PAGE analysis of NO-Mfp3
Figure 3-2 Western Blot analysis of NO-Mfp3
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 7
Illegal NheI site found at 30
Illegal NheI site found at 552
Illegal NheI site found at 836
Illegal NotI site found at 800 - 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]