Difference between revisions of "Part:BBa K5477012"
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− | Nuclear receptor coactivator (NCOA), also known as SRC (Steroid Receptor Coactivator), is a member of a family of transcriptional coactivators that enhance the activity of nuclear receptors. NCOA plays a | + | Nuclear receptor coactivator (NCOA), also known as SRC (Steroid Receptor Coactivator), is a member of a family of transcriptional coactivators that enhance the activity of nuclear receptors. NCOA plays a role in regulating gene expression of nuclear receptors. When nuclear receptors are activated by their ligands, NCOA is recruited to the receptor complex, where it interacts with histone acetyltransferases (HATs) and other chromatin-modifying enzymes to promote an open chromatin structure, facilitating transcriptional activation (3) (4). |
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+ | This part was used in the receptor module, where NCOA functions as a coactivator for nuclear receptors like AhR [https://parts.igem.org/Part:BBa_K3793004 BBa_K3793004], enhancing their ability to regulate the expression of XRE target genes when activated by ligands(1) (2). This facilitates transcriptional efficiency of AhR upon ligand binding initiating the transcription of NanoLuc in the reporter module [https://parts.igem.org/Part:BBa_K5477030 BBa_K5477030]. NCOA was also a part of the following composites and devices: [https://parts.igem.org/Part:BBa_K5477026 BBa_K5477026], [https://parts.igem.org/Part:BBa_K5477041 BBa_K5477041] and [https://parts.igem.org/Part:BBa_K5477042 BBa_K5477042]. | ||
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Latest revision as of 21:29, 1 October 2024
NCOA - Nuclear receptor coactivator (Steroid Receptor Coactivator)
Nuclear receptor coactivator (NCOA), also known as SRC (Steroid Receptor Coactivator), is a member of a family of transcriptional coactivators that enhance the activity of nuclear receptors. NCOA plays a role in regulating gene expression of nuclear receptors. When nuclear receptors are activated by their ligands, NCOA is recruited to the receptor complex, where it interacts with histone acetyltransferases (HATs) and other chromatin-modifying enzymes to promote an open chromatin structure, facilitating transcriptional activation (3) (4).
This part was used in the receptor module, where NCOA functions as a coactivator for nuclear receptors like AhR BBa_K3793004, enhancing their ability to regulate the expression of XRE target genes when activated by ligands(1) (2). This facilitates transcriptional efficiency of AhR upon ligand binding initiating the transcription of NanoLuc in the reporter module BBa_K5477030. NCOA was also a part of the following composites and devices: BBa_K5477026, BBa_K5477041 and BBa_K5477042.
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 1079
Illegal EcoRI site found at 1701
Illegal SpeI site found at 528
Illegal SpeI site found at 829
Illegal SpeI site found at 1896
Illegal PstI site found at 588 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 1079
Illegal EcoRI site found at 1701
Illegal NheI site found at 2841
Illegal SpeI site found at 528
Illegal SpeI site found at 829
Illegal SpeI site found at 1896
Illegal PstI site found at 588 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 1079
Illegal EcoRI site found at 1701
Illegal BamHI site found at 2343 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 1079
Illegal EcoRI site found at 1701
Illegal SpeI site found at 528
Illegal SpeI site found at 829
Illegal SpeI site found at 1896
Illegal PstI site found at 588 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 1079
Illegal EcoRI site found at 1701
Illegal SpeI site found at 528
Illegal SpeI site found at 829
Illegal SpeI site found at 1896
Illegal PstI site found at 588 - 1000COMPATIBLE WITH RFC[1000]
References
1. Carambia, A., Schuran, F.A. The aryl hydrocarbon receptor in liver inflammation. Semin Immunopathol 43, 563–575 (2021). https://doi.org/10.1007/s00281-021-00867-8
2. Goedtke L, Sprenger H, Hofmann U, Schmidt FF, Hammer HS, Zanger UM, Poetz O, Seidel A, Braeuning A, Hessel-Pras S. Polycyclic Aromatic Hydrocarbons Activate the Aryl Hydrocarbon Receptor and the Constitutive Androstane Receptor to Regulate Xenobiotic Metabolism in Human Liver Cells. Int J Mol Sci. 2020 Dec 31;22(1):372. doi: 10.3390/ijms22010372. PMID: 33396476; PMCID: PMC7796163.
3. Onate SA, Boonyaratanakornkit V, Spencer TE, et al. The steroid receptor coactivator-1 contains multiple receptor interacting and activation domains that cooperatively enhance the activation function 1 (AF1) and AF2 domains of steroid receptors. J Biol Chem. 1998;273(20):12101-12108. doi:10.1074/jbc.273.20.12101
4. Oñate SA, Tsai SY, Tsai MJ, O'Malley BW. Sequence and characterization of a coactivator for the steroid hormone receptor superfamily. Science. 1995;270(5240):1354-1357. doi:10.1126/science.270.5240.1354