Difference between revisions of "Part:BBa K5322006"
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<partinfo>BBa_K5322006 short</partinfo> | <partinfo>BBa_K5322006 short</partinfo> | ||
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− | < | + | <html> |
− | === | + | </p> |
+ | </html> | ||
+ | __TOC__ | ||
+ | |||
+ | ==Usage and Biology== | ||
+ | <p> | ||
+ | The plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7 utilizes the pET29a vector for high-level expression in <i>Escherichia coli</i>. To achieve better intestinal mucosal repair effects in the high NO environment associated with enteritis, we employed the oxidative stress-responsive SoxR/SoxS promoter, targeted specifically at the inflamed intestinal region for therapeutic purposes. The expression of SoxR is controlled by the strong constitutive promoter J23119, which responds to NO and activates the SoxR promoter, thereby regulating the expression of the mussel foot protein Mfp5. The ribosome binding site (RBS) ensures efficient translation of mRNA, while the T7 terminator provides a clean and efficient end for transcription. This system is designed for the efficient expression of Mfp5 in the high NO environment of enteritis, enhancing its adhesive properties. | ||
+ | </P> | ||
+ | |||
+ | ==Construction of the plasmid== | ||
+ | <html> | ||
+ | <p> | ||
+ | Due to the absence of endotoxins in <i>Escherichia coli</i> Nissle 1917 (EcN), we chose to use EcN as the chassis cell to enhance safety. To efficiently express the adhesin, we selected the strong constitutive promoter J23119 as the regulatory element. To achieve better intestinal mucosal repair effects in the high NO environment associated with enteritis, we utilized the oxidative stress-responsive SoxR/SoxS promoter, targeting the inflamed intestinal region for treatment. As shown in Figure 2-1, we designed the plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7. Through homologous recombination, we integrated this plasmid into EcN and selected individual <i>E. coli</i> colonies from several transformation plates for plasmid extraction. We performed PCR verification using specific primers targeting a 1165 bp fragment, as illustrated in Figure 2-2. The plasmids with correctly positioned bands were subjected to sequencing. The sequencing results in Figure 2-3 confirmed the successful construction of the plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7. | ||
+ | </p> | ||
+ | |||
+ | <style> | ||
+ | .center-img { | ||
+ | text-align:center; | ||
+ | } | ||
+ | </style> | ||
+ | <div class="center-img"> | ||
+ | <img src="https://static.igem.wiki/teams/5322/wet-lab/41-pet29a-j23119-soxr-t-psoxs-rbs-mfp5-t7.png" alt="pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7"width="300"> | ||
+ | <p align="center"><b>Figure 2-1</b> Plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7</p> | ||
+ | </div> | ||
+ | |||
+ | <div class="center-img"> | ||
+ | <img src="https://static.igem.wiki/teams/5322/wet-lab/50-pcr-mfp21.png" alt="gel" width="500"> | ||
+ | <p align="center"><b>Figure 2-2</b> Colony PCR gel electrophoresis of plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7(1165bp)</p> | ||
+ | </div> | ||
+ | |||
+ | <div class="center-img"> | ||
+ | <img src="https://static.igem.wiki/teams/5322/wet-lab/97-cexu-7.png" alt="cexu" width="600"> | ||
+ | <p align="center"><b>Figure 2-3</b> plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7 sequencing result</p> | ||
+ | </div> | ||
+ | |||
+ | </html> | ||
+ | |||
+ | ==Protein Expression Validation== | ||
+ | <html> | ||
+ | Given that the mussel adhesive proteins used in this study are intended for application in the treatment of mammalian enteritis, we selected 37°C, the temperature closest to body temperature, as the optimal induction temperature. The induction time was identified as a crucial factor influencing protein characterization. The recombinant strain EcN-pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7 was cultured until an OD600 of 0.8 was reached, followed by the addition of 200 μM sodium nitroprusside (SNP) for induction. The recombinant protein was expressed for 16 hours in the EcN strain, and detection was carried out using Tricine-SDS-PAGE, as shown in Figure 3-1.Finally, we performed a Western Blot, as shown in Figure 3-2, which confirmed that the NO-inducible Mfp5 can be expressed in a high NO environment. | ||
+ | <style> | ||
+ | .center-img { | ||
+ | text-align:center; | ||
+ | } | ||
+ | </style> | ||
+ | <div class="center-img"> | ||
+ | <img src="https://static.igem.wiki/teams/5322/wet-lab/53-pcr-mfp24.png" alt="SDS-PAGE"width="300"> | ||
+ | <p align="center"><b>Figure 3-1</b> Tricine-SDS-PAGE analysis of Mfp5</p> | ||
+ | </div> | ||
+ | |||
+ | <div class="center-img"> | ||
+ | <img src="https://static.igem.wiki/teams/5322/wet-lab/55-wb-mfp4.png" alt="WB"width="300"> | ||
+ | <p align="center"><b>Figure 3-2</b> Western Blot analysis of Mfp5</p> | ||
+ | </div> | ||
+ | |||
+ | </html> | ||
− | + | ==Sequence and Features== | |
− | + | <partinfo>BBa_K5101006 SequenceAndFeatures</partinfo> | |
− | <partinfo> | + | |
<!-- Uncomment this to enable Functional Parameter display | <!-- Uncomment this to enable Functional Parameter display | ||
− | + | ==Functional Parameters== | |
− | <partinfo> | + | <partinfo>BBa_K5101006 parameters</partinfo> |
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Revision as of 05:51, 1 October 2024
NO-inducible Mfp5 Expression System
Contents
Usage and Biology
The plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7 utilizes the pET29a vector for high-level expression in Escherichia coli. To achieve better intestinal mucosal repair effects in the high NO environment associated with enteritis, we employed the oxidative stress-responsive SoxR/SoxS promoter, targeted specifically at the inflamed intestinal region for therapeutic purposes. The expression of SoxR is controlled by the strong constitutive promoter J23119, which responds to NO and activates the SoxR promoter, thereby regulating the expression of the mussel foot protein Mfp5. The ribosome binding site (RBS) ensures efficient translation of mRNA, while the T7 terminator provides a clean and efficient end for transcription. This system is designed for the efficient expression of Mfp5 in the high NO environment of enteritis, enhancing its adhesive properties.
Construction of the plasmid
Due to the absence of endotoxins in Escherichia coli Nissle 1917 (EcN), we chose to use EcN as the chassis cell to enhance safety. To efficiently express the adhesin, we selected the strong constitutive promoter J23119 as the regulatory element. To achieve better intestinal mucosal repair effects in the high NO environment associated with enteritis, we utilized the oxidative stress-responsive SoxR/SoxS promoter, targeting the inflamed intestinal region for treatment. As shown in Figure 2-1, we designed the plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7. Through homologous recombination, we integrated this plasmid into EcN and selected individual E. coli colonies from several transformation plates for plasmid extraction. We performed PCR verification using specific primers targeting a 1165 bp fragment, as illustrated in Figure 2-2. The plasmids with correctly positioned bands were subjected to sequencing. The sequencing results in Figure 2-3 confirmed the successful construction of the plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7.
Figure 2-1 Plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7
Figure 2-2 Colony PCR gel electrophoresis of plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7(1165bp)
Figure 2-3 plasmid pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7 sequencing result
Protein Expression Validation
Given that the mussel adhesive proteins used in this study are intended for application in the treatment of mammalian enteritis, we selected 37°C, the temperature closest to body temperature, as the optimal induction temperature. The induction time was identified as a crucial factor influencing protein characterization. The recombinant strain EcN-pET29a-J23119-SoxR-T-pSoxS-RBS-Mfp5-T7 was cultured until an OD600 of 0.8 was reached, followed by the addition of 200 μM sodium nitroprusside (SNP) for induction. The recombinant protein was expressed for 16 hours in the EcN strain, and detection was carried out using Tricine-SDS-PAGE, as shown in Figure 3-1.Finally, we performed a Western Blot, as shown in Figure 3-2, which confirmed that the NO-inducible Mfp5 can be expressed in a high NO environment.
Figure 3-1 Tricine-SDS-PAGE analysis of Mfp5
Figure 3-2 Western Blot analysis of Mfp5
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]