Difference between revisions of "Part:BBa K3064030"
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| − | + | ==Improvement from the iGEM team NUDT-China 2024== | |
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<b>Group:</b> iGEM Team NUDT 2024 INTOSENS | <b>Group:</b> iGEM Team NUDT 2024 INTOSENS | ||
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<b>Author:</b> Hanyue Mao | <b>Author:</b> Hanyue Mao | ||
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| + | ===Profile=== | ||
| + | Name: miniPromoter | ||
| + | <br> Base Pairs: 32bp | ||
| + | <br> Origin: Artificial | ||
| + | <br> Properties: Shortened version of minimum TATA-box Promoter | ||
| + | <br> Short description: P_min | ||
| + | <br> Full description: Shortened version of minimum TATA-box Promoter. The miniPromoter shows low levels of transcription at baseline. | ||
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===Usage and Biology=== | ===Usage and Biology=== | ||
A promoter is a DNA sequence located in the upstream region of the 5' terminal of a structural gene, which activates RNA polymerase, makes it bind to template DNA accurately and has transcriptional initiation specificity. The general structure of promoters includes core promoter elements and upstream regulatory elements. The core promoter is usually composed of short conserved sequences such as transcription start sites and TATA | A promoter is a DNA sequence located in the upstream region of the 5' terminal of a structural gene, which activates RNA polymerase, makes it bind to template DNA accurately and has transcriptional initiation specificity. The general structure of promoters includes core promoter elements and upstream regulatory elements. The core promoter is usually composed of short conserved sequences such as transcription start sites and TATA | ||
Latest revision as of 14:14, 30 September 2024
miniPromoter
miniPromoter
Shortened version of minimum TATA-box Promoter. The miniPromoter shows low levels of transcription at baseline.
Usage and Biology
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
Improvement from the iGEM team NUDT-China 2024
Profile
Name: miniPromoter
Base Pairs: 32bp
Origin: Artificial
Properties: Shortened version of minimum TATA-box Promoter
Short description: P_min
Full description: Shortened version of minimum TATA-box Promoter. The miniPromoter shows low levels of transcription at baseline.
Usage and Biology
A promoter is a DNA sequence located in the upstream region of the 5' terminal of a structural gene, which activates RNA polymerase, makes it bind to template DNA accurately and has transcriptional initiation specificity. The general structure of promoters includes core promoter elements and upstream regulatory elements. The core promoter is usually composed of short conserved sequences such as transcription start sites and TATA Box, CAAT Box, BRE element, DPE element and MTE element, etc. [1] The structural characteristics of these sequences determine the recognition, binding and initiation of transcription of promoter and RNA polymerase. Upstream regulatory elements can change Bthe efficiency of transcription by combining with corresponding action factors.
The minimal promoter (Pmin) is usually composed of the basic TATA box, GC box and CAAT box of the promoter. Transfected vectors containing only Pmin will have a lower level of background expression when transfected into cells. But their promoter region does not contain other transcription factor binding sites, the constructed signaling pathway containing Pmin can specifically characterize whether a certain signaling pathway is activated or not.
Motivation
In order to verify the influence of CRE（cAMP response element） sequence on downstream pathway, we constructed Pmin using TATA box and GC box of CMW promoter. The Pmin is a low expression synthetic promoter in mammalian cells. CRE sequences can be placed upstream of this promoter to produce high expression of downstream genes
Reference
[1] A. Barroso-delJesus et al., "Embryonic stem cell-specific miR302-367 cluster: human gene structure and functional characterization of its core promoter," Mol Cell Biol, vol. 28, no. 21, pp. 6609-19, Nov 2008, doi: 10.1128/MCB.00398-08.