Difference between revisions of "Part:BBa K5241008"
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− | <span style="font-weight: bold;">Short Description:</span> | + | <span style="font-weight: bold;">Short Description:</span>"pPICZ α" refers to a vector containing the yeast alpha-factor signal peptide sequence, which aids in the proper secretion of proteins. It was developed by Invitrogen (now part of Thermo Fisher Scientific). "pPICZαA-PHDD-6xH" is a vector used for expressing the PHDD protein with a 6xHis tag in Pichia pastoris. |
<span style="font-size: 150%; font-weight: bold;">Gene Circuit Diagram:</span> | <span style="font-size: 150%; font-weight: bold;">Gene Circuit Diagram:</span> | ||
<html> | <html> | ||
− | <figure><img style="width: 65%; padding:28px;"src="https://static.igem.wiki/teams/5241/wiki/parts-static/8/bba-k5241008-img01.png"></figure> | + | <figure><img style="width: 65%; padding:28px;"src="https://static.igem.wiki/teams/5241/wiki/parts-static/8/bba-k5241008-img01.png"> |
+ | <figcaption>AOX1 promoter α-factor secretion signal pPICZaAPkrhdd-6xH 6xHis AOX1 terminator</figcaption> | ||
+ | </figure> | ||
</html> | </html> | ||
Latest revision as of 05:25, 30 September 2024
pPICZaAPkrhdd-6xH
Short Description:"pPICZ α" refers to a vector containing the yeast alpha-factor signal peptide sequence, which aids in the proper secretion of proteins. It was developed by Invitrogen (now part of Thermo Fisher Scientific). "pPICZαA-PHDD-6xH" is a vector used for expressing the PHDD protein with a 6xHis tag in Pichia pastoris.
Gene Circuit Diagram:
Description:
Choose the appropriate restriction enzymes to perform double digestion on the pPICZaA plasmid, generating sticky ends that match the target gene fragment (Pkrhdd) and the 6xHis tag sequence. Separate and purify the digested plasmid backbone. Perform a ligation reaction with the purified target gene fragment (Pkrhdd), the 6xHis tag sequence, and the digested pPICZaA plasmid backbone.
Result:
We are using chemical and electroporation methods to transform the pPICZaAPkrhdd-6xH into Pichia pastoris, and colonies have formed after cultivation, but there is no melanin expression after induction with methanol. This could be due to a failure in plasmid construction, or it could be due to other reasons.
Reference documentation
[1] Gätjen, D., Tomszak, F., Dettmann, J. C., Droste, M., Nölle, V., & Wieczorek, M. (2022). Design of a novel switchable antibody display system in Pichia pastoris. Applied Microbiology and Biotechnology, 106(18), 6209-6224. https://doi.org/10.1007/s00253-022-12108-5
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 43
Illegal EcoRI site found at 52
Illegal EcoRI site found at 967
Illegal XbaI site found at 5174
Illegal PstI site found at 925 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 43
Illegal EcoRI site found at 52
Illegal EcoRI site found at 967
Illegal NheI site found at 4469
Illegal PstI site found at 925 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 43
Illegal EcoRI site found at 52
Illegal EcoRI site found at 967
Illegal BglII site found at 1089
Illegal BglII site found at 2620
Illegal BamHI site found at 2977
Illegal XhoI site found at 1075
Illegal XhoI site found at 2284 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 43
Illegal EcoRI site found at 52
Illegal EcoRI site found at 967
Illegal XbaI site found at 5174
Illegal PstI site found at 925 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 43
Illegal EcoRI site found at 52
Illegal EcoRI site found at 967
Illegal XbaI site found at 5174
Illegal PstI site found at 925
Illegal NgoMIV site found at 342
Illegal AgeI site found at 319 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 5330
Illegal BsaI.rc site found at 316
Illegal BsaI.rc site found at 3129