Difference between revisions of "Part:BBa K5043006"

 
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<partinfo>BBa_K5043006 short</partinfo>
 
<partinfo>BBa_K5043006 short</partinfo>
  
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Encodes Phenanthrene ring-hydroxylating oxygenase, &#945; subunit. Presumably catalyzes as complex with pdoB2, phtAc and phtAd oxidation of Phenanthrene-4-carboxylate to cis-phenanthrene-3,4-dihydrodiol-4-carboxylate.
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Encodes Phenanthrene ring-hydroxylating oxygenase alpha subunit. Presumably catalyzes as complex with pdoB2, phtAc and phtAd oxidation of Phenanthrene-4-carboxylate to cis-phenanthrene-3,4-dihydrodiol-4-carboxylate. This is the fifth step in pyrene biodegradation. [1]
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[1] S.-J. Kim, O. Kweon, R. C. Jones, J. P. Freeman, R. D. Edmondson, and C. E. Cerniglia, "Complete and integrated pyrene degradation pathway in Mycobacterium vanbaalenii PYR-1 based on systems biology," Journal of bacteriology, vol. 189, no. 2, pp. 464–472, 2007, doi: 10.1128/jb.01310-06.
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<!-- Add more about the biology of this part here
 
<!-- Add more about the biology of this part here

Revision as of 18:07, 17 August 2024


pdoA2 from Mycobacterium sp. strain 6PY1

Encodes Phenanthrene ring-hydroxylating oxygenase alpha subunit. Presumably catalyzes as complex with pdoB2, phtAc and phtAd oxidation of Phenanthrene-4-carboxylate to cis-phenanthrene-3,4-dihydrodiol-4-carboxylate. This is the fifth step in pyrene biodegradation. [1]

[1] S.-J. Kim, O. Kweon, R. C. Jones, J. P. Freeman, R. D. Edmondson, and C. E. Cerniglia, "Complete and integrated pyrene degradation pathway in Mycobacterium vanbaalenii PYR-1 based on systems biology," Journal of bacteriology, vol. 189, no. 2, pp. 464–472, 2007, doi: 10.1128/jb.01310-06.


Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 1285
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 1285
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 1285
    Illegal XhoI site found at 448
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 1285
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 1285
    Illegal NgoMIV site found at 43
    Illegal NgoMIV site found at 723
  • 1000
    COMPATIBLE WITH RFC[1000]