Difference between revisions of "Part:BBa K4808009"
Line 9: | Line 9: | ||
<p> Step1: Transformation of the pEcCas plasmid(carry cas9 protein) into E. coli AIS-0 (CICC20905). Step2: construction of the pTarget plasmid and donor DNA. Step3: transformation of pTarget plasmid and donor DNA into the AIS-0 with pEsCas inserted. Step4: Incubation of the transformed strains. </p > | <p> Step1: Transformation of the pEcCas plasmid(carry cas9 protein) into E. coli AIS-0 (CICC20905). Step2: construction of the pTarget plasmid and donor DNA. Step3: transformation of pTarget plasmid and donor DNA into the AIS-0 with pEsCas inserted. Step4: Incubation of the transformed strains. </p > | ||
+ | <!-- --> | ||
+ | <span class='h3bb'>Sequence and Features</span> | ||
+ | <partinfo>BBa_K4808009 SequenceAndFeatures</partinfo> | ||
<!-- Uncomment this to enable Functional Parameter display | <!-- Uncomment this to enable Functional Parameter display | ||
===Functional Parameters=== | ===Functional Parameters=== | ||
− | <partinfo> | + | <partinfo>BBa_K4808009 parameters</partinfo> |
<!-- --> | <!-- --> |
Revision as of 10:42, 11 October 2023
pTarget
pTarget plasmid that carrying specific gRNA sequence which can identity the target gene for the further gene knockout.
Characterization
pTarget plasmid play an important role in our CRISPR-CAS 9 knocking out experiment.
Step1: Transformation of the pEcCas plasmid(carry cas9 protein) into E. coli AIS-0 (CICC20905). Step2: construction of the pTarget plasmid and donor DNA. Step3: transformation of pTarget plasmid and donor DNA into the AIS-0 with pEsCas inserted. Step4: Incubation of the transformed strains.
Sequence and Features
Assembly Compatibility:
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 330
Illegal XbaI site found at 336
Illegal SpeI site found at 221
Illegal PstI site found at 348 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 330
Illegal NheI site found at 198
Illegal SpeI site found at 221
Illegal PstI site found at 348 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 330
Illegal BglII site found at 360
Illegal BamHI site found at 186
Illegal XhoI site found at 384 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 330
Illegal XbaI site found at 336
Illegal SpeI site found at 221
Illegal PstI site found at 348 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 330
Illegal XbaI site found at 336
Illegal SpeI site found at 221
Illegal PstI site found at 348
Illegal NgoMIV site found at 1155 - 1000INCOMPATIBLE WITH RFC[1000]Illegal SapI.rc site found at 122