Difference between revisions of "Part:BBa K4937021"

 
 
(2 intermediate revisions by the same user not shown)
Line 3: Line 3:
 
<partinfo>BBa_K4937021 short</partinfo>
 
<partinfo>BBa_K4937021 short</partinfo>
  
.
+
<p>TEF1p-SPE1-PRM9t:</p>
 +
<p>This composite part was created by fusion PCR and used to exogenously express SPE1 gene and results in the overexpression of putrescine. This part was used in the oaz1Δ strain, in which the polyamine synthesis flux is stronger. We investigate whether this part can confer thermo-tolerance to resulted strain.</p>
 +
https://static.igem.wiki/teams/4937/wiki/part/021-1.png
 +
 
 +
<p>Using the OAZ1 knockout strain we previously constructed, we generated yeast expression plasmids to overexpress SPE1, to achieve overexpression of thermospermine. We initially obtained the plasmid backbone through PCR (Figure 1: 7-1 to 7-4) and the insert fragments (Figure 1: 7-5 is TEF1p-SPE1-PRM9t). Subsequently, we used homologous recombination to construct the complete plasmids and validated their successful construction through sequencing (Figure 2).</p>
 +
https://static.igem.wiki/teams/4937/wiki/part/021-2.png
 +
<p style=" text-align: center;">Figure 1</p>
 +
https://static.igem.wiki/teams/4937/wiki/part/021-3.png
 +
<p style=" text-align: center;">Figure 2</p>
 +
<p>We performed HPLC test to ensure that our engineered strains have improved production of putrescine, spermidine (Figure 3,4,5) and thermospermine. As shown in figure 6, the strain contains plasmid that overexpress SPE1 has a higher production of putrescine and spermidine, namely 6.95 mg/L and 8.1 mg/L, respectively, compared to 5.00 mg/L and 6.7 mg/L in strain contains plasmid vector. As we didn’t get the standard of thermospermine, we didn’t get a directly evidence of thermospermine prodution. </p>
 +
https://static.igem.wiki/teams/4937/wiki/part/21-5.png
 +
<p style=" text-align: center;">Figure 3</p>
 +
https://static.igem.wiki/teams/4937/wiki/part/21-6.png
 +
<p style=" text-align: center;">Figure 4</p>
 +
https://static.igem.wiki/teams/4937/wiki/part/21-7.png
 +
<p style=" text-align: center;">Figure 5</p>
 +
https://static.igem.wiki/teams/4937/wiki/part/21-8.png
 +
<p style=" text-align: center;">Figure 6</p>
 +
<p>Then we tested the growth of these strains under 35°C conditions (Figure 7). The results indicate that the expression of the SPE1 gene did not have a significant impact on the yeast's thermo-tolerance capabilities.</p>
 +
https://static.igem.wiki/teams/4937/wiki/part/021-4.png
 +
<p style=" text-align: center;">Figure 7</p>
 +
 
  
 
<!-- Add more about the biology of this part here
 
<!-- Add more about the biology of this part here

Latest revision as of 09:04, 4 October 2023


TEF1p-SPE1-PRM9t

TEF1p-SPE1-PRM9t:

This composite part was created by fusion PCR and used to exogenously express SPE1 gene and results in the overexpression of putrescine. This part was used in the oaz1Δ strain, in which the polyamine synthesis flux is stronger. We investigate whether this part can confer thermo-tolerance to resulted strain.

021-1.png

Using the OAZ1 knockout strain we previously constructed, we generated yeast expression plasmids to overexpress SPE1, to achieve overexpression of thermospermine. We initially obtained the plasmid backbone through PCR (Figure 1: 7-1 to 7-4) and the insert fragments (Figure 1: 7-5 is TEF1p-SPE1-PRM9t). Subsequently, we used homologous recombination to construct the complete plasmids and validated their successful construction through sequencing (Figure 2).

021-2.png

Figure 1

021-3.png

Figure 2

We performed HPLC test to ensure that our engineered strains have improved production of putrescine, spermidine (Figure 3,4,5) and thermospermine. As shown in figure 6, the strain contains plasmid that overexpress SPE1 has a higher production of putrescine and spermidine, namely 6.95 mg/L and 8.1 mg/L, respectively, compared to 5.00 mg/L and 6.7 mg/L in strain contains plasmid vector. As we didn’t get the standard of thermospermine, we didn’t get a directly evidence of thermospermine prodution.

21-5.png

Figure 3

21-6.png

Figure 4

21-7.png

Figure 5

21-8.png

Figure 6

Then we tested the growth of these strains under 35°C conditions (Figure 7). The results indicate that the expression of the SPE1 gene did not have a significant impact on the yeast's thermo-tolerance capabilities.

021-4.png

Figure 7


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 1871
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1607
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 167