Difference between revisions of "Part:BBa K4275038"

 
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<partinfo>BBa_K4275038 short</partinfo>
 
<partinfo>BBa_K4275038 short</partinfo>
  
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The composite part contains a pLac4 promoter, tTDH1 terminator, <i>Kluyveromyces marxianus</i> mating factor α (BBa_K4275000) and exoglucanase CBHII-t (cellobiohydrolase) fused with type I dockerin that constitute the assembly of cellulosome complex.
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The fusion of <i>Kluyveromyces marxianus</i> mating factor α enables the successful secretion of CBHII-t cellulase from the host yeast; the type I dockerin fused onto CBHII-t allows the cellulase to bind to type I cohesin on the CipA scaffoldin through cohesin-dockerin interaction and is thus assembled into the cellulosome complex that is anchored on the host.
  
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===Usage and Biology===
 
===Usage and Biology===
  
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<i>Kluyveromyces marxianus</i> mating factor α encodes for an α-mating factor (αMF) domain fused with CBHII-t. It functions as a secretion signal; the signal peptide expressed in the αMF domain directs the cellulase fused with it through endoplasmic reticulum, Golgi body and eventually secreted, allowing the CBHII-t to be secreted outside from the host cell, resulting in the successful integration of cellulosome complex outside the host.
<span class='h3bb'>Sequence and Features</span>
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CBHII-t is an exoglucanase (cellobiohydrolase) with type I dockerin (DocT) fused onto the C terminal of the enzyme with a linker used between the enzyme’s catalytic domain and the dockerin module. The CBHII enzyme possesses a cellulose binding domain and can progressively cleave cellobiose units from the ends of cellulose chains by hydrolyzing the beta-1,4-glycosidic bonds. The integration of CBHII-t into the cellulosome enables it to work in a synergy with other cellulases and significantly boost the degradation efficiency of the cellulosome complex.
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===Sequence and Features===
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<partinfo>BBa_K4275038 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K4275038 SequenceAndFeatures</partinfo>
  

Revision as of 02:30, 12 October 2022


pLAC4-KmarxMFα-CBHII-t-tTDH1

The composite part contains a pLac4 promoter, tTDH1 terminator, Kluyveromyces marxianus mating factor α (BBa_K4275000) and exoglucanase CBHII-t (cellobiohydrolase) fused with type I dockerin that constitute the assembly of cellulosome complex.

The fusion of Kluyveromyces marxianus mating factor α enables the successful secretion of CBHII-t cellulase from the host yeast; the type I dockerin fused onto CBHII-t allows the cellulase to bind to type I cohesin on the CipA scaffoldin through cohesin-dockerin interaction and is thus assembled into the cellulosome complex that is anchored on the host.

Usage and Biology

Kluyveromyces marxianus mating factor α encodes for an α-mating factor (αMF) domain fused with CBHII-t. It functions as a secretion signal; the signal peptide expressed in the αMF domain directs the cellulase fused with it through endoplasmic reticulum, Golgi body and eventually secreted, allowing the CBHII-t to be secreted outside from the host cell, resulting in the successful integration of cellulosome complex outside the host.

CBHII-t is an exoglucanase (cellobiohydrolase) with type I dockerin (DocT) fused onto the C terminal of the enzyme with a linker used between the enzyme’s catalytic domain and the dockerin module. The CBHII enzyme possesses a cellulose binding domain and can progressively cleave cellobiose units from the ends of cellulose chains by hydrolyzing the beta-1,4-glycosidic bonds. The integration of CBHII-t into the cellulosome enables it to work in a synergy with other cellulases and significantly boost the degradation efficiency of the cellulosome complex.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 331
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 331
    Illegal NheI site found at 89
    Illegal NheI site found at 1816
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 331
    Illegal XhoI site found at 1252
    Illegal XhoI site found at 2962
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 331
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 331
    Illegal NgoMIV site found at 2094
    Illegal AgeI site found at 2392
  • 1000
    COMPATIBLE WITH RFC[1000]