Difference between revisions of "Part:BBa K4340605"
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− | sfGFP(BBa_K2762014) is able to show fluorescence in acidic environment. We use this plasmid to test the growth curve in our hydroponic system. | + | sfGFP(BBa_K2762014) is able to show fluorescence in an acidic environment. We use this plasmid to test the growth curve in our hydroponic system. |
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+ | ==E.coli (sfGFP_pET11a) growth curve== | ||
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+ | <p>These are the results of our sfGFP_pET11a test. We measured the pH, OD 600, and fluorescence of the cell culture of the transformed E.coli. We use these three indicators to validate the pH neutralizing function and the survival and growth curve of the E.coli transformed with sfGFP_pET11a plasmid.</p> | ||
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+ | ===1. Fluorescence test=== | ||
+ | [[File:glsa-fl-ph5.png |400px|thumb|center| Figure 1. The Fluorescence Rate in pH 5 initial environment of sfGFP_pET11a and Pasr-glsA_pET11a.]] | ||
+ | [[File:glsa-fl-ph7.png |400px|thumb|center| Figure 2. The Fluorescence Rate in pH 7 initial environment of sfGFP_pET11a and Pasr-glsA_pET11a.]] | ||
+ | [[File:glsa-fl-ph9.png |400px|thumb|center| Figure 3. The Fluorescence Rate in pH 9 initial environment of sfGFP_pET11a and Pasr-glsA_pET11a.]] | ||
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+ | <p>The fluorescence of sfGFP in pH 5 is significantly higher than the fluorescence of Pasr-glsA. It is possibly because the protein size of the sfGFP is smaller than Pasr-glsA, which at the same time produces ammonia to neutralize the environment. In a pH 7 environment, the fluorescence of both sfGFP and Pasr-glsA is relatively similar and reached the same point at the eighth hour. In a pH 9 environment, both fluorescence of sfGFP and Pasr-glsA are low compared to data in pH 5 and 7. This proved that sfGFP and Pasr-glsA, which have the same acid promoter (asr) show low fluorescence in a high-pH environment.</p> | ||
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Latest revision as of 00:41, 12 October 2022
sfGFP
sfGFP(BBa_K2762014) is able to show fluorescence in an acidic environment. We use this plasmid to test the growth curve in our hydroponic system.
E.coli (sfGFP_pET11a) growth curve
These are the results of our sfGFP_pET11a test. We measured the pH, OD 600, and fluorescence of the cell culture of the transformed E.coli. We use these three indicators to validate the pH neutralizing function and the survival and growth curve of the E.coli transformed with sfGFP_pET11a plasmid.
1. Fluorescence test
The fluorescence of sfGFP in pH 5 is significantly higher than the fluorescence of Pasr-glsA. It is possibly because the protein size of the sfGFP is smaller than Pasr-glsA, which at the same time produces ammonia to neutralize the environment. In a pH 7 environment, the fluorescence of both sfGFP and Pasr-glsA is relatively similar and reached the same point at the eighth hour. In a pH 9 environment, both fluorescence of sfGFP and Pasr-glsA are low compared to data in pH 5 and 7. This proved that sfGFP and Pasr-glsA, which have the same acid promoter (asr) show low fluorescence in a high-pH environment.
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal XbaI site found at 1283
Illegal PstI site found at 5809 - 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 1238
Illegal PstI site found at 5809 - 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 1349
Illegal BamHI site found at 1205 - 23INCOMPATIBLE WITH RFC[23]Illegal XbaI site found at 1283
Illegal PstI site found at 5809 - 25INCOMPATIBLE WITH RFC[25]Illegal XbaI site found at 1283
Illegal PstI site found at 5809
Illegal NgoMIV site found at 1381
Illegal NgoMIV site found at 2969
Illegal NgoMIV site found at 3129
Illegal NgoMIV site found at 3483
Illegal AgeI site found at 752 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 5635
Illegal SapI site found at 4552