Difference between revisions of "Part:BBa K4164003"
(6 intermediate revisions by 2 users not shown) | |||
Line 3: | Line 3: | ||
<partinfo>BBa_K4164003 short</partinfo> | <partinfo>BBa_K4164003 short</partinfo> | ||
− | RXR | + | Retinoid X receptor alpha (RXR-alpha), also known as NR2B1 (nuclear receptor subfamily 2, group B, member 1) is a nuclear receptor that in humans is encoded by the <em>RXRA</em> gene. |
+ | |||
+ | RXR is associated with multiple cellular processes from cell proliferation to cell metabolism. RXRs have the ability to form heterodimers with subfamily 1 nuclear receptors including CAR, FXR, LXR, PPAR, PXR, RAR, TR and VDR. | ||
+ | |||
+ | As with other type II nuclear receptors, the RXR heterodimer in the absence of ligand is bound to hormone response elements complexed with corepressor proteins. Binding of agonist ligands to RXR results in dissociation of corepressor and recruitment of coactivator protein, which, in turn, promotes transcription of the downstream target gene into mRNA and eventually protein. Alternatively, binding of RXR ligands to heterodimers can stimulate transcriptional activation of RXR chaperone receptors. For example, when binding as a heterodimer with activated FXR in liver cells, it will regulate the metabolic processes of bile acid (BA), lipid and glucose. | ||
+ | |||
+ | In our project, we took advantage of the characteristics of RXR that it can bind to the farnesoid X receptor(FXR) as a heterodimer when activated by de-sulfated CDCA-S. After it forms a heterodimeric complex with FXR, the linked ddRFP-A1 and ddRFP-B1 are correspondingly driven to dimerize and emit fluorescence. | ||
<!-- Add more about the biology of this part here | <!-- Add more about the biology of this part here | ||
Line 11: | Line 17: | ||
<span class='h3bb'>Sequence and Features</span> | <span class='h3bb'>Sequence and Features</span> | ||
<partinfo>BBa_K4164003 SequenceAndFeatures</partinfo> | <partinfo>BBa_K4164003 SequenceAndFeatures</partinfo> | ||
− | |||
<!-- Uncomment this to enable Functional Parameter display | <!-- Uncomment this to enable Functional Parameter display |
Latest revision as of 06:51, 11 October 2022
Retinoid X receptor-alpha(RXRα)
Retinoid X receptor alpha (RXR-alpha), also known as NR2B1 (nuclear receptor subfamily 2, group B, member 1) is a nuclear receptor that in humans is encoded by the RXRA gene.
RXR is associated with multiple cellular processes from cell proliferation to cell metabolism. RXRs have the ability to form heterodimers with subfamily 1 nuclear receptors including CAR, FXR, LXR, PPAR, PXR, RAR, TR and VDR.
As with other type II nuclear receptors, the RXR heterodimer in the absence of ligand is bound to hormone response elements complexed with corepressor proteins. Binding of agonist ligands to RXR results in dissociation of corepressor and recruitment of coactivator protein, which, in turn, promotes transcription of the downstream target gene into mRNA and eventually protein. Alternatively, binding of RXR ligands to heterodimers can stimulate transcriptional activation of RXR chaperone receptors. For example, when binding as a heterodimer with activated FXR in liver cells, it will regulate the metabolic processes of bile acid (BA), lipid and glucose.
In our project, we took advantage of the characteristics of RXR that it can bind to the farnesoid X receptor(FXR) as a heterodimer when activated by de-sulfated CDCA-S. After it forms a heterodimeric complex with FXR, the linked ddRFP-A1 and ddRFP-B1 are correspondingly driven to dimerize and emit fluorescence.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 357
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 739