Difference between revisions of "Part:BBa K4361009"

 
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Similar to BBa_K4361007, but here incorporating the perfect inverted repeat pair found in BBa_K4361005.
 
Similar to BBa_K4361007, but here incorporating the perfect inverted repeat pair found in BBa_K4361005.
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===Usage and Biology===
 
  
 
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<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>
 
<partinfo>BBa_K4361009 SequenceAndFeatures</partinfo>
 
<partinfo>BBa_K4361009 SequenceAndFeatures</partinfo>
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<h3>Usage and biology</h3>
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<html>
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<h3>Results</h3>
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~~~
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<figure>
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<a href="https://static.igem.wiki/teams/4361/wiki/parts/oligos-09.png"><img src="https://static.igem.wiki/teams/4361/wiki/parts/oligos-09.png" style="width:300px;margin-left:275px"></a>
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<figcaption> <b>Figure 2.</b> Results of the second Tapestation experiment, in which the fraction of DNA bound to BlcR was determined for different types of oligos. The first bar and bottom dashed line represent the results with </html>[[Part:BBa_K4361000]]<html> (scrambled oligo, negative control), the second bar and top dashed line correspond to those with </html>[[Part:BBa_K4361001]]<html> (wildtype oligo, positive control). The third bar depicts the measured fraction of bound DNA for this part.</figcaption>
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</figure>
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<figure>
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<a href="https://static.igem.wiki/teams/4361/wiki/parts/add-ssa-09.png"><img src="https://static.igem.wiki/teams/4361/wiki/parts/add-ssa-09.png" style="width:300px;margin-left:275px"></a>
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<figcaption> <b>Figure 3.</b> Results of the third Tapestation experiment, in which the fraction of DNA bound to BlcR was determined for different types of oligos in the
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<span style="color:#4CCAF1;">presence</span>
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or
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<span style="color:#4460EF">absence</span>
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of 25 &mu;M SSA. The first set of bars represents the results with </html>[[Part:BBa_K4361000]]<html> (scrambled oligo, negative control), the second set of bars corresponds to those of </html>[[Part:BBa_K4361001]]<html> (wildtype oligo, positive control). The third set depicts the measured fraction of bound DNA for this part.</figcaption>
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</figure>
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</html>
  
  

Revision as of 14:15, 8 October 2022


BlcR-binding oligo, 51 bp, IR1 perfect RV 2 outer 5 + IR2

Similar to BBa_K4361007, but here incorporating the perfect inverted repeat pair found in BBa_K4361005.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]

Usage and biology

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Results

~~~
Figure 2. Results of the second Tapestation experiment, in which the fraction of DNA bound to BlcR was determined for different types of oligos. The first bar and bottom dashed line represent the results with Part:BBa_K4361000 (scrambled oligo, negative control), the second bar and top dashed line correspond to those with Part:BBa_K4361001 (wildtype oligo, positive control). The third bar depicts the measured fraction of bound DNA for this part.
Figure 3. Results of the third Tapestation experiment, in which the fraction of DNA bound to BlcR was determined for different types of oligos in the presence or absence of 25 μM SSA. The first set of bars represents the results with Part:BBa_K4361000 (scrambled oligo, negative control), the second set of bars corresponds to those of Part:BBa_K4361001 (wildtype oligo, positive control). The third set depicts the measured fraction of bound DNA for this part.