Difference between revisions of "Part:BBa K4232003"

 
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
  
 
__NOTOC__
 
__NOTOC__
−
<partinfo>BBa_K4232001 short</partinfo>
+
<partinfo>BBa_K4232003 short</partinfo>
 +
 
 +
This part of the code is the promoter '''icd'''. The ICD promoter, known as isocitrate dehydrogenase, is derived from the E. coli top10 strain. It can be used as a sensor for the rate of oxygen consumption in the cell body (the mechanism of action is shown in Figure 1).
 +
 
 +
The icd contains two functional modules - cra and arca. cra and arca partially overlap and it is mainly the arca module that performs the oxygen consumption rate detection function, so if you want to use the icd as an oxygen consumption rate sensor you should deactivate the cra module as much as possible (as shown in figure 2 below).
 +
 
 +
[[File:BIT-China-parts-arca-mechanism.jpeg|400px|thumb|left|'''Figure 1''' The mechanism about icd]]
 +
[[File:BIT-China-parts-arca.jpeg|430px|thumb|right|'''Figure 2''' How to use icd as an Oxygen sensitive promoter]]
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
  
−
This part of the code is the promoter icd. It is derived from the E. coli genome. This part is useful for the detection of intracellular oxygen consumption rate.
 
  
 
<!-- Add more about the biology of this part here
 
<!-- Add more about the biology of this part here
Line 10: Line 35:
 
<!-- -->
 
<!-- -->
 
<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>
−
<partinfo>BBa_K4232001 SequenceAndFeatures</partinfo>
+
<partinfo>BBa_K4232003 SequenceAndFeatures</partinfo>
  
  
 
<!-- Uncomment this to enable Functional Parameter display  
 
<!-- Uncomment this to enable Functional Parameter display  
 
===Functional Parameters===
 
===Functional Parameters===
−
<partinfo>BBa_K4232001 parameters</partinfo>
+
<partinfo>BBa_K4232003 parameters</partinfo>
 
<!-- -->
 
<!-- -->

Latest revision as of 02:41, 28 September 2022


A promoter sensitive to oxygen consumption rate.

This part of the code is the promoter icd. The ICD promoter, known as isocitrate dehydrogenase, is derived from the E. coli top10 strain. It can be used as a sensor for the rate of oxygen consumption in the cell body (the mechanism of action is shown in Figure 1).

The icd contains two functional modules - cra and arca. cra and arca partially overlap and it is mainly the arca module that performs the oxygen consumption rate detection function, so if you want to use the icd as an oxygen consumption rate sensor you should deactivate the cra module as much as possible (as shown in figure 2 below).

Figure 1 The mechanism about icd
Figure 2 How to use icd as an Oxygen sensitive promoter











Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 498
  • 1000
    COMPATIBLE WITH RFC[1000]